Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | MNY58_RS04210 | Genome accession | NZ_CP093217 |
| Coordinates | 917962..918381 (+) | Length | 139 a.a. |
| NCBI ID | WP_099090868.1 | Uniprot ID | A0A2C6U5I8 |
| Organism | Staphylococcus edaphicus strain CCM 8731 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 912962..923381
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MNY58_RS04180 (MNY58_04180) | atpD | 912963..914375 (+) | 1413 | WP_099090862.1 | F0F1 ATP synthase subunit beta | - |
| MNY58_RS04185 (MNY58_04185) | - | 914396..914800 (+) | 405 | WP_099090863.1 | F0F1 ATP synthase subunit epsilon | - |
| MNY58_RS04190 (MNY58_04190) | - | 915179..915412 (+) | 234 | WP_099090864.1 | DUF1146 family protein | - |
| MNY58_RS04195 (MNY58_04195) | murA | 915519..916784 (+) | 1266 | WP_099090865.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| MNY58_RS04200 (MNY58_04200) | fabZ | 916839..917276 (+) | 438 | WP_099090866.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| MNY58_RS04205 (MNY58_04205) | - | 917330..917770 (-) | 441 | WP_099090867.1 | YwpF-like family protein | - |
| MNY58_RS04210 (MNY58_04210) | ssb | 917962..918381 (+) | 420 | WP_099090868.1 | single-stranded DNA-binding protein | Machinery gene |
| MNY58_RS04215 (MNY58_04215) | - | 918800..919504 (+) | 705 | WP_249740169.1 | transglycosylase family protein | - |
| MNY58_RS04220 (MNY58_04220) | tenA | 919933..920622 (+) | 690 | WP_099091326.1 | thiaminase II | - |
| MNY58_RS04225 (MNY58_04225) | thiD | 920615..921436 (+) | 822 | WP_099091325.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| MNY58_RS04230 (MNY58_04230) | thiM | 921429..922220 (+) | 792 | WP_099091327.1 | hydroxyethylthiazole kinase | - |
| MNY58_RS04235 (MNY58_04235) | thiE | 922220..922858 (+) | 639 | WP_099091324.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 16125.66 Da Isoelectric Point: 6.7067
>NTDB_id=662602 MNY58_RS04210 WP_099090868.1 917962..918381(+) (ssb) [Staphylococcus edaphicus strain CCM 8731]
MINNIVIVGRLTKDPKIYDKEGKKLATFCVAVTRNYKDKNQNTICDYLFCKAFGKIATNIELYINQGSLVGITGQMQSHK
YVKEGQTHFVSEILIETIKFMSPRTKDENDILFEPFPLEQIHDPFKEMKIQENDIYEIV
MINNIVIVGRLTKDPKIYDKEGKKLATFCVAVTRNYKDKNQNTICDYLFCKAFGKIATNIELYINQGSLVGITGQMQSHK
YVKEGQTHFVSEILIETIKFMSPRTKDENDILFEPFPLEQIHDPFKEMKIQENDIYEIV
Nucleotide
Download Length: 420 bp
>NTDB_id=662602 MNY58_RS04210 WP_099090868.1 917962..918381(+) (ssb) [Staphylococcus edaphicus strain CCM 8731]
ATGATCAACAATATTGTAATTGTAGGGAGATTAACTAAAGACCCTAAAATATACGACAAGGAGGGGAAAAAATTAGCTAC
ATTTTGTGTGGCTGTTACAAGAAACTATAAAGATAAGAATCAAAATACGATATGTGATTATTTATTTTGTAAAGCATTTG
GAAAGATAGCTACTAATATTGAATTGTATATTAATCAAGGATCACTGGTAGGTATCACAGGCCAAATGCAATCACATAAA
TATGTAAAAGAAGGACAGACGCATTTTGTATCAGAAATACTTATTGAAACGATTAAATTCATGTCTCCACGAACTAAAGA
CGAAAACGATATACTTTTTGAACCATTCCCACTAGAACAAATTCATGACCCTTTCAAAGAAATGAAAATACAAGAAAATG
ATATATATGAAATTGTATAA
ATGATCAACAATATTGTAATTGTAGGGAGATTAACTAAAGACCCTAAAATATACGACAAGGAGGGGAAAAAATTAGCTAC
ATTTTGTGTGGCTGTTACAAGAAACTATAAAGATAAGAATCAAAATACGATATGTGATTATTTATTTTGTAAAGCATTTG
GAAAGATAGCTACTAATATTGAATTGTATATTAATCAAGGATCACTGGTAGGTATCACAGGCCAAATGCAATCACATAAA
TATGTAAAAGAAGGACAGACGCATTTTGTATCAGAAATACTTATTGAAACGATTAAATTCATGTCTCCACGAACTAAAGA
CGAAAACGATATACTTTTTGAACCATTCCCACTAGAACAAATTCATGACCCTTTCAAAGAAATGAAAATACAAGAAAATG
ATATATATGAAATTGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
66.957 |
82.734 |
0.554 |
| ssb | Staphylococcus aureus MW2 |
66.087 |
82.734 |
0.547 |