Detailed information NTG0662480

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG233_RS21030
• Genome accession: NZ_CP108536
• Coordinates: 4839557..4840855 (+)
• Length: 432 a.a.
• NCBI ID: WP_275494203.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01218
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4834557..4845855

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG233_RS21000 (OG233_20995)	-	4835353..4835547 (+)	195	WP_266704317.1	hypothetical protein	-
OG233_RS21015 (OG233_21010)	tig	4836279..4837676 (+)	1398	WP_275494201.1	trigger factor	-
OG233_RS21020 (OG233_21015)	-	4838021..4838626 (+)	606	WP_275496154.1	ATP-dependent Clp protease proteolytic subunit	-
OG233_RS21025 (OG233_21020)	clpP	4838716..4839399 (+)	684	WP_275494202.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG233_RS21030 (OG233_21025)	clpX	4839557..4840855 (+)	1299	WP_275494203.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG233_RS21035 (OG233_21030)	-	4840931..4841959 (-)	1029	WP_327269522.1	hypothetical protein	-
OG233_RS21040 (OG233_21035)	-	4842096..4844717 (+)	2622	WP_327269523.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47389.20 Da
• Isoelectric Point: 4.8852

>NTDB_id=662480 OG233_RS21030 WP_275494203.1 4839557..4840855(+) (clpX) [Streptomyces sp. NBC_01218]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGSSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIEARSGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=662480 OG233_RS21030 WP_275494203.1 4839557..4840855(+) (clpX) [Streptomyces sp. NBC_01218]
GTGGCACGCATCGGTGATGGCGGCGACTTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAACTCGCCGAGACCT
CGGAAGTGCGCTGGGAAGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGAGGTTCGAGTCG
GGACGACGCGATCGAGCTCGCCAAGTCGAACATCCTCCTGCTGGGCCCGACGGGTTCCGGCAAGACGCTGCTGGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGATACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGACGTCTCGGGCGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGGGGCGCCTTCTCCGGTCTGGAGAAGATCATCGAGGCCCGGTCCGGTGC
CAAGGGCATCGGGTTCGGCGCGACGATCCGTTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTCCCCGTCCTCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTCTTCGAACTCGACGGAGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGGCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGTGTGGTCATCACC
CCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGCCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516