Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG233_RS13425 Genome accession   NZ_CP108536
Coordinates   3168954..3170078 (+) Length   374 a.a.
NCBI ID   WP_275492805.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01218     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3163954..3175078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG233_RS13410 (OG233_13415) - 3164016..3166172 (-) 2157 WP_327268720.1 hypothetical protein -
  OG233_RS13415 (OG233_13420) - 3166490..3167353 (-) 864 WP_327268721.1 class I SAM-dependent methyltransferase -
  OG233_RS13420 (OG233_13425) radA/sms 3167461..3168873 (+) 1413 WP_275492804.1 DNA repair protein RadA Machinery gene
  OG233_RS13425 (OG233_13430) disA 3168954..3170078 (+) 1125 WP_275492805.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG233_RS13430 (OG233_13435) - 3170209..3171054 (-) 846 WP_327268722.1 hypothetical protein -
  OG233_RS13435 (OG233_13440) - 3171297..3172202 (+) 906 WP_275492807.1 A/G-specific adenine glycosylase -
  OG233_RS13440 (OG233_13445) - 3172327..3173031 (-) 705 WP_275492808.1 M23 family metallopeptidase -
  OG233_RS13445 (OG233_13450) - 3173508..3173867 (+) 360 WP_327268723.1 trypco2 family protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40269.16 Da        Isoelectric Point: 5.0196

>NTDB_id=662462 OG233_RS13425 WP_275492805.1 3168954..3170078(+) (disA) [Streptomyces sp. NBC_01218]
MAANDRASSPGKSGQGTGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVMNVEFAATRLR
ELCKLDGALILDKDITKILRAGVQLVPDAAIPTEETGTRHRTADRVSKSCGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTPKRSRTVAEALTELDALSHSELLELAVVARSLGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IMERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=662462 OG233_RS13425 WP_275492805.1 3168954..3170078(+) (disA) [Streptomyces sp. NBC_01218]
GTGGCAGCCAACGACCGGGCATCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAAGCGCTCATGCGCGCTTCGCT
GAGCGCGGTCGCGCCCGGAACGGCCCTGCGCGACGGGCTGGAACGCATCCTGCGGGGGAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGATGAACGTCGAGTTCGCCGCGACGCGTCTGCGC
GAGCTCTGCAAGCTCGACGGGGCGCTCATCCTGGACAAGGACATCACCAAGATCCTCCGGGCGGGCGTGCAGCTCGTCCC
GGACGCCGCGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCGGACCGCGTCTCCAAGTCCTGTGGTTTCCCGG
TGGTCTCCGTCTCCCAGTCGATGCGTCTGATCGCGCTCTACGTCGACGGTGAGCGGCGGGTCCTGGAGGAGTCGTCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGGATCG
CGACGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGACGTCTGCTGTCGCTCCAGTTGGACGAGCTGATCGCG
GGGGTGGAGCCGGAGCGCGAGCTGGTGGTCCGCGACTACGTCCCCGAGCCGACCCCGAAGCGGTCGCGCACGGTCGCGGA
GGCGCTGACCGAGCTGGACGCCCTGAGCCACTCCGAGCTGCTCGAACTCGCCGTGGTGGCACGCTCGCTGGGGTACAGCG
GTTCGCCCGAGACGCTGGACTCCGCGGTCTCGCCGCGGGGTTTCCGGCTGCTGGCGAAGGTCCCGAGGCTCCCCGGCGCG
ATCATGGAGCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCGGCGAGTGTGGACGATCTCCAGGCCGTGGA
CGGCGTCGGGGAGGCGCGGGCGCGGAGCGTCCGGGAGGGCCTCTCCCGGCTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441