Detailed information NTG0662417

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG345_RS27585
• Genome accession: NZ_CP108531
• Coordinates: 6168893..6170191 (+)
• Length: 432 a.a.
• NCBI ID: WP_148018684.1
• Uniprot ID: A0ABY9IW47
• Organism: Streptomyces sp. NBC_01220
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6163893..6175191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG345_RS27555 (OG345_27515)	-	6164933..6165127 (+)	195	WP_219569646.1	hypothetical protein	-
OG345_RS27570 (OG345_27530)	tig	6165706..6167100 (+)	1395	WP_219569644.1	trigger factor	-
OG345_RS27575 (OG345_27535)	-	6167367..6167972 (+)	606	WP_168713553.1	ATP-dependent Clp protease proteolytic subunit	-
OG345_RS27580 (OG345_27540)	clpP	6168053..6168736 (+)	684	WP_306070064.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG345_RS27585 (OG345_27545)	clpX	6168893..6170191 (+)	1299	WP_148018684.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG345_RS27590 (OG345_27550)	-	6170941..6171909 (-)	969	WP_371603811.1	hypothetical protein	-
OG345_RS27595 (OG345_27555)	-	6172049..6174670 (+)	2622	WP_329541858.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47403.23 Da
• Isoelectric Point: 4.8390

>NTDB_id=662417 OG345_RS27585 WP_148018684.1 6168893..6170191(+) (clpX) [Streptomyces sp. NBC_01220]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDEGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=662417 OG345_RS27585 WP_148018684.1 6168893..6170191(+) (clpX) [Streptomyces sp. NBC_01220]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACGGCGGCGGCGCGAACCG
CGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTCCCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGCCTCGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGAGTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGTGACGAGGGGCG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516