Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG345_RS22650 Genome accession   NZ_CP108531
Coordinates   5044637..5045761 (-) Length   374 a.a.
NCBI ID   WP_114245192.1    Uniprot ID   A0ABY9IUC4
Organism   Streptomyces sp. NBC_01220     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5039637..5050761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG345_RS22625 (OG345_22575) cseB 5040024..5040728 (-) 705 WP_219572037.1 two-component system response regulator CseB -
  OG345_RS22630 (OG345_22580) - 5040739..5041515 (-) 777 WP_371603498.1 hypothetical protein -
  OG345_RS22635 (OG345_22585) - 5041503..5042147 (-) 645 WP_219572036.1 SigE family RNA polymerase sigma factor -
  OG345_RS22640 (OG345_22590) - 5042353..5043255 (-) 903 WP_219575455.1 A/G-specific adenine glycosylase -
  OG345_RS22645 (OG345_22595) - 5043594..5044418 (+) 825 WP_328949211.1 hypothetical protein -
  OG345_RS22650 (OG345_22600) disA 5044637..5045761 (-) 1125 WP_114245192.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG345_RS22655 (OG345_22605) radA/sms 5045886..5047298 (-) 1413 WP_371603499.1 DNA repair protein RadA Machinery gene
  OG345_RS22660 (OG345_22610) - 5047483..5049459 (+) 1977 WP_371603500.1 hypothetical protein -
  OG345_RS22665 (OG345_22615) - 5049549..5050388 (-) 840 WP_328949209.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40372.27 Da        Isoelectric Point: 4.9352

>NTDB_id=662407 OG345_RS22650 WP_114245192.1 5044637..5045761(-) (disA) [Streptomyces sp. NBC_01220]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=662407 OG345_RS22650 WP_114245192.1 5044637..5045761(-) (disA) [Streptomyces sp. NBC_01220]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAGGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTCGCCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTCCAGCTGGTCCC
GGACGCCTCGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCACCTCATCGCGCTGTACGTGGATGGCGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCCCAGCGTCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACCGACGGCCGGCTCCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTACGTGCCGGAGCCGACCGCGAAGCGTTCACGCACGGTGGCGGA
GGCGCTCACCGAGCTGGACGCGCTGTCCCACACCGAGCTGCTGGAACTCCCGGTCGTGGCAAGGGCGCTGGGCTACAGCG
GCTCCCCCGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGACTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCGCGGGCACGCAGCGTGCGCGAGGGCCTGTCGCGACTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436