Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG609_RS22895 Genome accession   NZ_CP108529
Coordinates   5118808..5119932 (-) Length   374 a.a.
NCBI ID   WP_327274523.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01224     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5113808..5124932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG609_RS22870 (OG609_22920) - 5114488..5115129 (-) 642 WP_327278145.1 hypothetical protein -
  OG609_RS22875 (OG609_22925) - 5115216..5115866 (-) 651 WP_327274519.1 SigE family RNA polymerase sigma factor -
  OG609_RS22880 (OG609_22930) - 5116041..5116943 (-) 903 WP_327274520.1 A/G-specific adenine glycosylase -
  OG609_RS22885 (OG609_22935) - 5117088..5117732 (-) 645 WP_327274521.1 phosphatase PAP2 family protein -
  OG609_RS22890 (OG609_22940) - 5117906..5118721 (+) 816 WP_327274522.1 hypothetical protein -
  OG609_RS22895 (OG609_22945) disA 5118808..5119932 (-) 1125 WP_327274523.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG609_RS22900 (OG609_22950) radA/sms 5120013..5121425 (-) 1413 WP_327274524.1 DNA repair protein RadA Machinery gene
  OG609_RS22905 (OG609_22955) - 5121612..5123555 (+) 1944 WP_327274525.1 hypothetical protein -
  OG609_RS22910 (OG609_22960) - 5123670..5124521 (-) 852 WP_327274526.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40390.30 Da        Isoelectric Point: 4.9352

>NTDB_id=662328 OG609_RS22895 WP_327274523.1 5118808..5119932(-) (disA) [Streptomyces sp. NBC_01224]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARAMGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=662328 OG609_RS22895 WP_327274523.1 5118808..5119932(-) (disA) [Streptomyces sp. NBC_01224]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCTGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTTC
TGGGCATGGACAGAACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACCGCGACGCGCCTGCGC
GAGCTGGCCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCACCTCATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAATCAGGCACTCGCCACCCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACCCTCTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGATGTGACCGCCGTCGCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCGGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTCCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGAGAGCTGGTCGTGCGCGACTATGTGCCGGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCCGA
AGCCCTGACCGAGCTCGACGCGCTCTCCCACACCGAACTTCTCGAACTCCCCGTCGTGGCACGGGCGATGGGGTACAGCG
GCTCGCCGGAGACGCTGGATTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGACTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAACTCCTTGCCGCCAGCGTGGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCGAGGAGCGTGCGCGAGGGACTGTCGCGACTGGCCGAGTCGTCGATTCTCGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433