Detailed information NTG0662257

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG763_RS29415
• Genome accession: NZ_CP108522
• Coordinates: 6485324..6486622 (+)
• Length: 432 a.a.
• NCBI ID: WP_030921263.1
• Uniprot ID: A0ABV2UFH0
• Organism: Streptomyces sp. NBC_01230
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6480324..6491622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG763_RS29385 (OG763_29435)	-	6481448..6481642 (+)	195	WP_030921275.1	hypothetical protein	-
OG763_RS29400 (OG763_29450)	tig	6482177..6483565 (+)	1389	WP_327423396.1	trigger factor	-
OG763_RS29405 (OG763_29455)	-	6483830..6484435 (+)	606	WP_018551584.1	ATP-dependent Clp protease proteolytic subunit	-
OG763_RS29410 (OG763_29460)	clpP	6484483..6485166 (+)	684	WP_030921266.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG763_RS29415 (OG763_29465)	clpX	6485324..6486622 (+)	1299	WP_030921263.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG763_RS29420 (OG763_29470)	-	6486692..6487705 (-)	1014	WP_327423397.1	hypothetical protein	-
OG763_RS29425 (OG763_29475)	-	6487844..6490465 (+)	2622	WP_327423398.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47270.09 Da
• Isoelectric Point: 4.8824

>NTDB_id=662257 OG763_RS29415 WP_030921263.1 6485324..6486622(+) (clpX) [Streptomyces sp. NBC_01230]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=662257 OG763_RS29415 WP_030921263.1 6485324..6486622(+) (clpX) [Streptomyces sp. NBC_01230]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGTCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGTTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGTGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAGGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGATCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGTCTTC
GGGCCATCATGGAGGAGGTCCTGCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGTGTCGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGACG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509