Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG444_RS21905 Genome accession   NZ_CP108518
Coordinates   4740829..4741953 (-) Length   374 a.a.
NCBI ID   WP_327263784.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01232     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4735829..4746953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG444_RS21875 (OG444_21860) cseB 4736048..4736761 (-) 714 WP_327263779.1 two-component system response regulator CseB -
  OG444_RS21880 (OG444_21865) - 4736791..4737432 (-) 642 WP_327263780.1 hypothetical protein -
  OG444_RS21885 (OG444_21870) - 4737468..4738028 (-) 561 WP_030010715.1 SigE family RNA polymerase sigma factor -
  OG444_RS21890 (OG444_21875) - 4738214..4739155 (-) 942 WP_327263781.1 A/G-specific adenine glycosylase -
  OG444_RS21895 (OG444_21880) - 4739179..4739802 (-) 624 WP_327263782.1 phosphatase PAP2 family protein -
  OG444_RS21900 (OG444_21885) - 4740025..4740759 (+) 735 WP_327263783.1 hypothetical protein -
  OG444_RS21905 (OG444_21890) disA 4740829..4741953 (-) 1125 WP_327263784.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG444_RS21910 (OG444_21895) radA/sms 4742136..4743548 (-) 1413 WP_327263785.1 DNA repair protein RadA Machinery gene
  OG444_RS21915 (OG444_21900) - 4743836..4745599 (+) 1764 WP_327263786.1 hypothetical protein -
  OG444_RS21920 (OG444_21905) - 4745649..4746509 (-) 861 WP_327263787.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40347.30 Da        Isoelectric Point: 4.9472

>NTDB_id=662161 OG444_RS21905 WP_327263784.1 4740829..4741953(-) (disA) [Streptomyces sp. NBC_01232]
MAAKDGAAASGKSGAGSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKNVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELAIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=662161 OG444_RS21905 WP_327263784.1 4740829..4741953(-) (disA) [Streptomyces sp. NBC_01232]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGCAAGTCGGGCGCCGGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCTTGGAACGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGTATGGACAAGAACGTCGAGGCGATGTGCACCGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTGCC
GGACGCCTCGATCCCGACGGAGGAGACGGGCACGCGCCACCGCACGGCCGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGTGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCACTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTGGCGGGCACGCTGTC
GGCGCTGGAGATCGAAGACCTGGTCACCGTCCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGTCTGCTGTCGCTGCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAGCTGGACGCTCTGACGCATCCGGAACTGCTGGAGCTGGCGATCGTGGCACGGGCGCTGGGGTACACGG
GCTCGCCGGAGACCCTGGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCGAAGGTTCCGAGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGGGGCCTGCAGAAGCTTCTGGCGGCTTCGGTGGACGACCTCCAGGCCGTGGA
CGGCGTGGGCGAGGCCCGGGCCCGCAGCGTCCGCGAGGGCCTCTCCCGCCTGGCCGAGTCGTCCATCCTGGAACGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447