Detailed information NTG0066202

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: AS19_RS02450
• Genome accession: NZ_AP014613
• Coordinates: 512208..513602 (-)
• Length: 464 a.a.
• NCBI ID: WP_046961666.1
• Uniprot ID: A0AAD1B0C8
• Organism: Alcanivorax sp. NBRC 101098
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 507208..518602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AS19_RS02435 (AS19_04830)	-	510089..510538 (+)	450	WP_011587754.1	type IV pilin protein	-
AS19_RS02440 (AS19_04840)	-	510535..511050 (-)	516	WP_041704821.1	GspH/FimT family pseudopilin	-
AS19_RS02445 (AS19_04850)	-	511153..512268 (+)	1116	WP_046961665.1	FAD-binding oxidoreductase	-
AS19_RS02450 (AS19_04860)	pilR	512208..513602 (-)	1395	WP_046961666.1	sigma-54 dependent transcriptional regulator	Regulator
AS19_RS02455 (AS19_04870)	-	513614..515167 (-)	1554	WP_046961667.1	PAS domain-containing sensor histidine kinase	-
AS19_RS02460 (AS19_04880)	-	515157..515399 (-)	243	WP_011587759.1	PP0621 family protein	-
AS19_RS02465 (AS19_04890)	-	515522..517147 (+)	1626	WP_011587760.1	NAD+ synthase	-
AS19_RS02470 (AS19_04900)	-	517250..518068 (-)	819	WP_011587761.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 464 a.a.
• Molecular weight: 52027.14 Da
• Isoelectric Point: 5.2164

>NTDB_id=66202 AS19_RS02450 WP_046961666.1 512208..513602(-) (pilR) [Alcanivorax sp. NBRC 101098]
MSAEAPHVLVVDDEADLRELLVITLGRMKLQATAADSLSTAKQRLKEAHYDLCLTDMNLGDGTGLELLQFISQYCPTMPT
AVITAYGSMKTATDAMKYGAYDFIAKPVALDRLRQLIEDGLGINEVEEHHEEEDNLIGDAPSMVALKSQVRKLARSQAPI
YISGESGSGKERIARLIHTLGPRREKPFVAVNCGAIPSELMESEFFGHRKGAFTGAVEDRKGLFREADGGTLFLDEVADL
PLHMQVKLLRAIQEKSVRPVGEAKEFQVNLRILCATHKNLEDEMEEGRFRQDLFYRLNVIEAHVPPLRERREDIPKLVRH
ILDRLSQAWEIPPPSVSSDAVNAIGNYAFPGNVRELENTLERALTLCDGNTILPEHLRLPSNRSGLASNRSSTSTSPPPI
RPSEQPLEEFLQEIEKQEILKALDTTHWNRTAAAKKLGMTFRSLRYRLKKLELDRDDDETDDNE

Nucleotide

• Length: 1395 bp

>NTDB_id=66202 AS19_RS02450 WP_046961666.1 512208..513602(-) (pilR) [Alcanivorax sp. NBRC 101098]
ATGAGTGCAGAAGCCCCCCACGTATTGGTTGTTGACGATGAAGCTGACCTGCGCGAACTGCTGGTCATCACGCTCGGCCG
CATGAAACTTCAGGCCACCGCCGCCGACTCTCTGTCCACTGCCAAACAGCGCCTTAAAGAGGCACACTACGATCTCTGCC
TGACAGATATGAACCTGGGGGATGGTACCGGCCTAGAGCTTCTCCAATTCATTTCACAATATTGTCCGACTATGCCCACT
GCCGTAATAACCGCCTACGGCAGCATGAAAACCGCCACCGATGCGATGAAATATGGCGCCTATGATTTTATTGCCAAGCC
TGTCGCTCTTGACCGATTAAGGCAGTTAATTGAAGACGGGCTGGGCATCAACGAAGTCGAAGAACACCATGAAGAAGAAG
ATAATCTGATTGGTGACGCGCCCAGCATGGTCGCGCTAAAAAGCCAGGTTCGAAAGTTGGCGCGCAGCCAAGCGCCTATT
TATATAAGTGGCGAATCAGGAAGCGGTAAAGAGCGTATCGCACGATTAATTCACACGTTAGGACCGCGCCGGGAAAAACC
GTTTGTGGCAGTAAACTGCGGCGCCATACCGTCTGAACTAATGGAAAGTGAATTTTTTGGCCATCGCAAAGGCGCATTTA
CCGGCGCGGTGGAAGACCGAAAGGGACTGTTCCGCGAAGCTGATGGCGGCACCTTATTTCTCGATGAAGTGGCCGACCTT
CCCTTACATATGCAGGTCAAACTGCTACGAGCCATTCAGGAAAAATCCGTTCGACCGGTAGGCGAAGCCAAGGAATTCCA
AGTCAATCTACGGATTCTCTGCGCCACCCACAAGAACCTGGAAGACGAAATGGAAGAGGGGCGTTTTCGTCAGGATCTTT
TCTATCGGCTTAATGTTATCGAGGCTCACGTTCCGCCGTTACGCGAGCGACGTGAAGATATTCCAAAGCTGGTTCGGCAT
ATTCTCGACCGGCTCAGCCAAGCCTGGGAAATTCCGCCGCCCAGCGTTAGCTCTGACGCGGTGAATGCCATTGGCAACTA
CGCGTTTCCCGGCAATGTCAGGGAGTTGGAAAACACCCTGGAGCGGGCGCTAACATTGTGTGACGGCAACACTATTCTCC
CCGAACACCTGCGCCTACCATCAAACCGTTCTGGGCTGGCCTCAAACCGTTCTAGCACTTCAACCTCGCCCCCCCCCATA
AGACCCAGCGAACAGCCCCTGGAAGAGTTTCTTCAGGAAATCGAAAAACAGGAAATACTCAAGGCTCTGGATACAACTCA
CTGGAATCGTACCGCCGCCGCAAAAAAACTCGGCATGACCTTCCGCTCTTTGCGCTACCGATTGAAAAAGCTGGAGCTGG
ACCGTGATGACGACGAAACAGACGATAACGAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (411-451)

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.955	96.336	0.578
pilR	Acinetobacter baumannii strain A118	48.729	100	0.496