Detailed information NTG0661249

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG693_RS12010
• Genome accession: NZ_CP108467
• Coordinates: 2661551..2662849 (-)
• Length: 432 a.a.
• NCBI ID: WP_327336834.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01259
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2656551..2667849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG693_RS12000 (OG693_12005)	-	2657705..2660326 (-)	2622	WP_371632612.1	valine--tRNA ligase	-
OG693_RS12005 (OG693_12010)	-	2660477..2661475 (+)	999	WP_328696906.1	hypothetical protein	-
OG693_RS12010 (OG693_12015)	clpX	2661551..2662849 (-)	1299	WP_327336834.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG693_RS12015 (OG693_12020)	clpP	2663007..2663690 (-)	684	WP_024492986.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG693_RS12020 (OG693_12025)	-	2663766..2664371 (-)	606	WP_164494417.1	ATP-dependent Clp protease proteolytic subunit	-
OG693_RS12025 (OG693_12030)	tig	2664636..2666033 (-)	1398	WP_327336835.1	trigger factor	-
OG693_RS12040 (OG693_12045)	-	2666625..2666819 (-)	195	WP_145763503.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47362.18 Da
• Isoelectric Point: 4.7809

>NTDB_id=661249 OG693_RS12010 WP_327336834.1 2661551..2662849(-) (clpX) [Streptomyces sp. NBC_01259]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGASRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=661249 OG693_RS12010 WP_327336834.1 2661551..2662849(-) (clpX) [Streptomyces sp. NBC_01259]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGCCC
GCGAAGAAGGCTCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGGGGCGAGCCG
TGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGTGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTTGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCCAGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCGGACCAGGCGATCCTGCGCCAGACCGGCGCCCGAGGCCTGC
GCGCGATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCTGACGTGGTCCGCAACAACGTCAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGGAAGAACGACGACGGCAG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.268	93.287	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509