Detailed information NTG0661206

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG322_RS25305
• Genome accession: NZ_CP108464
• Coordinates: 5699677..5700975 (+)
• Length: 432 a.a.
• NCBI ID: WP_123471015.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01260
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5694677..5705975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG322_RS25275 (OG322_25325)	-	5695706..5695900 (+)	195	WP_123471025.1	hypothetical protein	-
OG322_RS25290 (OG322_25340)	tig	5696479..5697885 (+)	1407	WP_123471022.1	trigger factor	-
OG322_RS25295 (OG322_25345)	-	5698151..5698756 (+)	606	WP_164494417.1	ATP-dependent Clp protease proteolytic subunit	-
OG322_RS25300 (OG322_25350)	clpP	5698836..5699519 (+)	684	WP_123471017.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG322_RS25305 (OG322_25355)	clpX	5699677..5700975 (+)	1299	WP_123471015.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG322_RS25310 (OG322_25360)	-	5701048..5702040 (-)	993	WP_266412026.1	hypothetical protein	-
OG322_RS25315 (OG322_25365)	-	5702191..5704812 (+)	2622	WP_123471010.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47305.12 Da
• Isoelectric Point: 4.7809

>NTDB_id=661206 OG322_RS25305 WP_123471015.1 5699677..5700975(+) (clpX) [Streptomyces sp. NBC_01260]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=661206 OG322_RS25305 WP_123471015.1 5699677..5700975(+) (clpX) [Streptomyces sp. NBC_01260]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGGACGGGCCG
TGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGTTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGTTTCGGCGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGTGCGCGCGGTCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGACGGGCG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509