Detailed information NTG0661114

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG226_RS32445
• Genome accession: NZ_CP108463
• Coordinates: 7284658..7285944 (+)
• Length: 428 a.a.
• NCBI ID: WP_328683355.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01261
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7279658..7290944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG226_RS32415 (OG226_32370)	-	7280672..7280866 (+)	195	WP_328683352.1	hypothetical protein	-
OG226_RS32430 (OG226_32385)	tig	7281455..7282822 (+)	1368	WP_328683353.1	trigger factor	-
OG226_RS32435 (OG226_32390)	clpP	7283165..7283767 (+)	603	WP_327407260.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG226_RS32440 (OG226_32395)	clpP	7283818..7284498 (+)	681	WP_328683354.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG226_RS32445 (OG226_32400)	clpX	7284658..7285944 (+)	1287	WP_328683355.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG226_RS32450 (OG226_32405)	-	7286023..7287030 (-)	1008	WP_328683356.1	hypothetical protein	-
OG226_RS32455 (OG226_32410)	-	7287167..7289791 (+)	2625	WP_329350887.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46891.69 Da
• Isoelectric Point: 4.7838

>NTDB_id=661114 OG226_RS32445 WP_328683355.1 7284658..7285944(+) (clpX) [Streptomyces sp. NBC_01261]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGEHGGGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=661114 OG226_RS32445 WP_328683355.1 7284658..7285944(+) (clpX) [Streptomyces sp. NBC_01261]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTGGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTTGAGGGGTACGTCGTAGGCCAGGAGTCG
GCCAAGAAGGCTCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGCACGGCGGCGGTCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCACAGA
CCCTGGCCCGCATGCTGAACGTGCCGTTCGCGATCGCCGACGCGACCGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTCATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGCGAGAACCCCTCGATCACCCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAACACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGCTGCAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGGCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCGCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACT
GCGGACGTCGTCCTGTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGGGGCCGAGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516