Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG757_RS19180 Genome accession   NZ_CP108462
Coordinates   4173711..4174835 (+) Length   374 a.a.
NCBI ID   WP_329314092.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01262     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4168711..4179835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG757_RS19165 (OG757_19130) - 4169639..4170433 (+) 795 WP_329314086.1 hypothetical protein -
  OG757_RS19170 (OG757_19135) - 4170430..4171965 (-) 1536 WP_329314088.1 sigma-70 family RNA polymerase sigma factor -
  OG757_RS19175 (OG757_19140) radA/sms 4172255..4173643 (+) 1389 WP_329314090.1 DNA repair protein RadA Machinery gene
  OG757_RS19180 (OG757_19145) disA 4173711..4174835 (+) 1125 WP_329314092.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG757_RS19185 (OG757_19150) - 4174859..4175668 (-) 810 WP_329314094.1 hypothetical protein -
  OG757_RS19190 (OG757_19155) - 4175817..4176689 (+) 873 WP_329314096.1 A/G-specific adenine glycosylase -
  OG757_RS19195 (OG757_19160) - 4176939..4177487 (+) 549 WP_329322023.1 SigE family RNA polymerase sigma factor -
  OG757_RS19200 (OG757_19165) - 4177472..4178116 (+) 645 WP_329314098.1 hypothetical protein -
  OG757_RS19205 (OG757_19170) cseB 4178109..4178795 (+) 687 WP_329314101.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40254.19 Da        Isoelectric Point: 4.9949

>NTDB_id=660994 OG757_RS19180 WP_329314092.1 4173711..4174835(+) (disA) [Streptomyces sp. NBC_01262]
MAANDRATSPGKSGGSSGLDVLMRASLSAVAPGTLLRDGLERILRGNTGGLIVLGIDKTVESLCSGGFVLDVEFSATRLR
ELCKLDGALILDKDITKIVRAGVQLVPDASIPTEETGTRHRTAQRVSIQTGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVPEALVELDTLFQGDLLELPAVARALGYAGSPEALDSAVSPRGYRLLAKVPRLPNT
VIERLVEHFGGLQKLLAASVGDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=660994 OG757_RS19180 WP_329314092.1 4173711..4174835(+) (disA) [Streptomyces sp. NBC_01262]
GTGGCAGCCAACGACCGGGCGACATCTCCCGGCAAGTCCGGCGGGAGTTCCGGCCTCGATGTGCTGATGCGCGCCTCGCT
CAGCGCCGTCGCCCCGGGCACGTTGCTGCGCGACGGTCTGGAACGGATCCTGCGCGGCAACACCGGTGGTCTCATCGTCC
TGGGCATCGACAAGACGGTGGAGTCGCTGTGCTCCGGCGGCTTCGTCCTCGACGTCGAGTTCAGCGCCACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGACATCACCAAGATCGTGCGGGCCGGCGTCCAGCTCGTGCC
CGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCACCGCACCGCCCAGCGCGTCTCCATCCAGACCGGCTTCCCGG
TGGTCTCCGTCAGCCAGTCCATGCGGCTCATCGCCCTCTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTGTCGCGCGCCAACCAGGCCCTGGCCACCCTGGAGCGCTACAAGCTGCGCCTGGACGAGGTCGCCGGCACGCTGTC
CGCCCTGGAGATCGAGGACCTGGTCACCGTCCGCGATGTCACCGCCGTGGCCCAGCGCCTGGAGATGGTCCGCCGCATCG
CCACCGAGATCGCCGAGTACGTCGTCGAGCTCGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTCGACGAGCTGATCGCC
GGCGTCGAGCCCGAGCGCGAGCTCGTCGTGCGCGACTACGTCCCCGAGCCCACCGCCAAGCGCAGCCGCACCGTCCCCGA
GGCCCTCGTCGAGCTCGACACCCTCTTCCAGGGCGATCTCCTCGAACTCCCCGCCGTCGCCCGCGCCCTCGGCTACGCCG
GCTCCCCCGAGGCCCTGGACTCCGCGGTCTCCCCGCGCGGCTACCGGCTGCTCGCCAAGGTGCCCCGGCTCCCCAACACC
GTCATCGAACGCCTCGTCGAGCACTTCGGCGGCCTCCAGAAGCTGCTCGCCGCCAGCGTCGGCGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGCGCGCGCTCGGTGCGCGAGGGGCTCTCGCGACTCGCCGAGTCCTCGATCCTGGAGCGGTACG
TGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.409

96.791

0.449