Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ML603_RS00340 Genome accession   NZ_CP092887
Coordinates   53363..53461 (+) Length   32 a.a.
NCBI ID   WP_014611913.1    Uniprot ID   A0A380JYX6
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 48363..58461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS00320 (ML603_00320) purE 49351..49839 (+) 489 WP_241067276.1 5-(carboxyamino)imidazole ribonucleotide mutase -
  ML603_RS00325 (ML603_00325) purK 49826..50920 (+) 1095 WP_241067277.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  ML603_RS00330 (ML603_00330) purB 50930..52222 (+) 1293 WP_241067278.1 adenylosuccinate lyase -
  ML603_RS00335 (ML603_00335) comR 52364..53275 (+) 912 WP_241067279.1 XRE family transcriptional regulator Regulator
  ML603_RS00340 (ML603_00340) comS 53363..53461 (+) 99 WP_014611913.1 quorum-sensing system DWW-type pheromone Regulator
  ML603_RS00345 (ML603_00345) ruvB 53495..54493 (+) 999 WP_241067281.1 Holliday junction branch migration DNA helicase RuvB -
  ML603_RS00350 (ML603_00350) - 54628..55059 (+) 432 WP_241067283.1 low molecular weight protein-tyrosine-phosphatase -
  ML603_RS00355 (ML603_00355) - 55088..55489 (+) 402 WP_003049089.1 MORN repeat-containing protein -
  ML603_RS00360 (ML603_00360) - 55486..57261 (+) 1776 WP_241067284.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3771.59 Da        Isoelectric Point: 10.4764

>NTDB_id=660898 ML603_RS00340 WP_014611913.1 53363..53461(+) (comS) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MFKKIKPYLLLAAVVAFKVARAMNEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=660898 ML603_RS00340 WP_014611913.1 53363..53461(+) (comS) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGTTTAAAAAAATCAAACCATATTTGTTATTAGCCGCAGTCGTTGCTTTCAAAGTTGCTCGTGCAATGAACGAATTTGA
TTGGTGGAACCTAGGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380JYX6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

84.375

100

0.844
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437