Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG295_RS19475 Genome accession   NZ_CP108442
Coordinates   4352537..4353661 (-) Length   374 a.a.
NCBI ID   WP_030236804.1    Uniprot ID   A0A2K8PHY8
Organism   Streptomyces sp. NBC_01276     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4347537..4358661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG295_RS19445 (OG295_19455) cseB 4347605..4348318 (-) 714 WP_371678010.1 two-component system response regulator CseB -
  OG295_RS19450 (OG295_19460) - 4348335..4348985 (-) 651 WP_371678011.1 hypothetical protein -
  OG295_RS19455 (OG295_19465) - 4349024..4349584 (-) 561 WP_030236813.1 SigE family RNA polymerase sigma factor -
  OG295_RS19460 (OG295_19470) - 4349812..4350732 (-) 921 WP_371678012.1 A/G-specific adenine glycosylase -
  OG295_RS19465 (OG295_19475) - 4350761..4351369 (-) 609 WP_371678013.1 phosphatase PAP2 family protein -
  OG295_RS19470 (OG295_19480) - 4351593..4352330 (+) 738 WP_371678014.1 hypothetical protein -
  OG295_RS19475 (OG295_19485) disA 4352537..4353661 (-) 1125 WP_030236804.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG295_RS19480 (OG295_19490) radA/sms 4353861..4355279 (-) 1419 WP_266839796.1 DNA repair protein RadA Machinery gene
  OG295_RS19485 (OG295_19495) - 4355427..4357205 (+) 1779 WP_371678015.1 hypothetical protein -
  OG295_RS19490 (OG295_19500) - 4357211..4358029 (-) 819 WP_371678016.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40364.36 Da        Isoelectric Point: 5.1189

>NTDB_id=660760 OG295_RS19475 WP_030236804.1 4352537..4353661(-) (disA) [Streptomyces sp. NBC_01276]
MAAKDGASAPGKSGASSKHDALMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKNVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=660760 OG295_RS19475 WP_030236804.1 4352537..4353661(-) (disA) [Streptomyces sp. NBC_01276]
GTGGCAGCCAAGGACGGGGCATCAGCACCCGGGAAGTCCGGCGCGAGCTCCAAGCACGACGCGCTGATGCGCGCCTCGCT
GAGCGCCGTCGCGCCTGGTCAGCCCCTGCGCGACGGCCTGGAGCGGATCGTCCGCGGCAACACGGGCGGGCTCATCGTCC
TCGGCATGGACAAGAACGTCGAGGCGATGTGCACGGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTGCC
CGACGCGTCGATCCCGACGGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGCGTCTCGAAGCAGTGCGGCTTCCCGG
TGGTCTCCGTGTCCCAGTCGATGCGGCTGATCGCCCTCTACGTCGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACCCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCGGGGACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACCGTCCGCGACGTGACGGCGGTCGCCCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACGGAAATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGACGACTGCTGTCGCTCCAGCTGGACGAACTGACCGTC
GGCATCGAGCAGGAGCGGGAGCTGGTGATCCGGGACTACGTTCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGAGGA
AGCGCTGCCGGCGCTGGACGCGCTGACCCATCCGGAACTGCTGGAACTGGCGATCGTGGCGAAGGCCCTGGGGTACACCG
GCTCGCCGGAGACCCTCGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCCAAGGTGCCGAGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTGGCGGCGTCGGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGTGCGCGCAGCGTCCGCGAGGGCCTGTCCCGCCTGGCGGAGTCGTCGATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2K8PHY8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444