Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MK860_RS05560 Genome accession   NZ_CP092829
Coordinates   1155391..1155588 (+) Length   65 a.a.
NCBI ID   WP_003211983.1    Uniprot ID   -
Organism   Bacillus pumilus strain MS32     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1150391..1160588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MK860_RS05530 (MK860_05520) - 1150799..1150978 (+) 180 WP_003211282.1 YjzC family protein -
  MK860_RS05535 (MK860_05525) - 1151148..1152413 (+) 1266 WP_065098863.1 MFS transporter -
  MK860_RS05540 (MK860_05530) - 1152530..1152724 (-) 195 WP_003211779.1 YjzD family protein -
  MK860_RS05545 (MK860_05535) - 1152936..1153676 (+) 741 WP_003211061.1 hypothetical protein -
  MK860_RS05550 (MK860_05540) - 1153752..1154327 (+) 576 WP_268484149.1 nad binding enzyme -
  MK860_RS05555 (MK860_05545) med 1154418..1155380 (+) 963 WP_065098861.1 BMP family ABC transporter substrate-binding protein Regulator
  MK860_RS05560 (MK860_05550) comZ 1155391..1155588 (+) 198 WP_003211983.1 ComZ family protein Regulator
  MK860_RS05565 (MK860_05555) - 1155599..1155832 (-) 234 WP_044139923.1 hypothetical protein -
  MK860_RS05570 (MK860_05560) - 1156002..1156940 (+) 939 WP_003212296.1 beta-ketoacyl-ACP synthase III -
  MK860_RS05575 (MK860_05565) fabF 1156962..1158203 (+) 1242 WP_003211631.1 beta-ketoacyl-ACP synthase II -
  MK860_RS05580 (MK860_05570) - 1158281..1159075 (+) 795 WP_185107555.1 DUF2268 domain-containing protein -
  MK860_RS05585 (MK860_05575) - 1159246..1160226 (+) 981 WP_268507255.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1652

>NTDB_id=660581 MK860_RS05560 WP_003211983.1 1155391..1155588(+) (comZ) [Bacillus pumilus strain MS32]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=660581 MK860_RS05560 WP_003211983.1 1155391..1155588(+) (comZ) [Bacillus pumilus strain MS32]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCAAAAGAAGAATTAGATAAAGC
AGGTATTCAGCTTGAGCCTGAAGCTCTTCAGCCGCTTTTATCATTGTTTACATCTGTTATGCAAGAGGCTTATGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677