Detailed information NTG0660580

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: MK860_RS05555
• Genome accession: NZ_CP092829
• Coordinates: 1154418..1155380 (+)
• Length: 320 a.a.
• NCBI ID: WP_065098861.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain MS32
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1149418..1160380

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MK860_RS05525 (MK860_05515)	argF	1149746..1150696 (+)	951	WP_106067196.1	ornithine carbamoyltransferase	-
MK860_RS05530 (MK860_05520)	-	1150799..1150978 (+)	180	WP_003211282.1	YjzC family protein	-
MK860_RS05535 (MK860_05525)	-	1151148..1152413 (+)	1266	WP_065098863.1	MFS transporter	-
MK860_RS05540 (MK860_05530)	-	1152530..1152724 (-)	195	WP_003211779.1	YjzD family protein	-
MK860_RS05545 (MK860_05535)	-	1152936..1153676 (+)	741	WP_003211061.1	hypothetical protein	-
MK860_RS05550 (MK860_05540)	-	1153752..1154327 (+)	576	WP_268484149.1	nad binding enzyme	-
MK860_RS05555 (MK860_05545)	med	1154418..1155380 (+)	963	WP_065098861.1	BMP family ABC transporter substrate-binding protein	Regulator
MK860_RS05560 (MK860_05550)	comZ	1155391..1155588 (+)	198	WP_003211983.1	ComZ family protein	Regulator
MK860_RS05565 (MK860_05555)	-	1155599..1155832 (-)	234	WP_044139923.1	hypothetical protein	-
MK860_RS05570 (MK860_05560)	-	1156002..1156940 (+)	939	WP_003212296.1	beta-ketoacyl-ACP synthase III	-
MK860_RS05575 (MK860_05565)	fabF	1156962..1158203 (+)	1242	WP_003211631.1	beta-ketoacyl-ACP synthase II	-
MK860_RS05580 (MK860_05570)	-	1158281..1159075 (+)	795	WP_185107555.1	DUF2268 domain-containing protein	-
MK860_RS05585 (MK860_05575)	-	1159246..1160226 (+)	981	WP_268507255.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35635.54 Da
• Isoelectric Point: 5.4531

>NTDB_id=660580 MK860_RS05555 WP_065098861.1 1154418..1155380(+) (med) [Bacillus pumilus strain MS32]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNIISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNAQGEYSFDFKEGVIEMGKFSSTIDRAFLKDIESDIASYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=660580 MK860_RS05555 WP_065098861.1 1154418..1155380(+) (med) [Bacillus pumilus strain MS32]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTGTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACATCATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTTGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTTGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGACGGCTTTATCAAAGGTGCAAAGTATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAACAGGGCGTAGATGTTGTATATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACCGATCAATCT
AACCTCGGCAGCCATACTGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTATAGTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAATGCACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTTTGAAAGACATTGAAAGTGATATTGCGTCTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	63.259	97.813	0.619