Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MK848_RS19535 Genome accession   NZ_CP092824
Coordinates   3806126..3806317 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain S1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3801126..3811317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MK848_RS19505 (MK848_19465) argF 3801990..3802949 (+) 960 WP_014476421.1 ornithine carbamoyltransferase -
  MK848_RS19510 (MK848_19470) yjzC 3803035..3803214 (+) 180 WP_003245356.1 YjzC family protein -
  MK848_RS19515 (MK848_19475) yjzD 3803261..3803446 (-) 186 WP_003245236.1 YjzD family protein -
  MK848_RS19520 (MK848_19480) - 3803695..3804429 (+) 735 WP_032721340.1 hypothetical protein -
  MK848_RS19525 (MK848_19485) - 3804511..3805068 (+) 558 WP_101172488.1 hypothetical protein -
  MK848_RS19530 (MK848_19490) med 3805158..3806111 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  MK848_RS19535 (MK848_19495) comZ 3806126..3806317 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  MK848_RS19540 (MK848_19500) yjzB 3806347..3806577 (-) 231 WP_080265337.1 spore coat protein YjzB -
  MK848_RS19545 (MK848_19505) fabH 3806742..3807680 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  MK848_RS19550 (MK848_19510) fabF 3807703..3808944 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  MK848_RS19555 (MK848_19515) yjaZ 3809020..3809805 (+) 786 WP_069322523.1 DUF2268 domain-containing protein -
  MK848_RS19560 (MK848_19520) appD 3809997..3810983 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=660468 MK848_RS19535 WP_003224559.1 3806126..3806317(+) (comZ) [Bacillus subtilis strain S1]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=660468 MK848_RS19535 WP_003224559.1 3806126..3806317(+) (comZ) [Bacillus subtilis strain S1]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1