Detailed information NTG0660467

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: MK848_RS19530
• Genome accession: NZ_CP092824
• Coordinates: 3805158..3806111 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain S1
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3800158..3811111

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MK848_RS19505 (MK848_19465)	argF	3801990..3802949 (+)	960	WP_014476421.1	ornithine carbamoyltransferase	-
MK848_RS19510 (MK848_19470)	yjzC	3803035..3803214 (+)	180	WP_003245356.1	YjzC family protein	-
MK848_RS19515 (MK848_19475)	yjzD	3803261..3803446 (-)	186	WP_003245236.1	YjzD family protein	-
MK848_RS19520 (MK848_19480)	-	3803695..3804429 (+)	735	WP_032721340.1	hypothetical protein	-
MK848_RS19525 (MK848_19485)	-	3804511..3805068 (+)	558	WP_101172488.1	hypothetical protein	-
MK848_RS19530 (MK848_19490)	med	3805158..3806111 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
MK848_RS19535 (MK848_19495)	comZ	3806126..3806317 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
MK848_RS19540 (MK848_19500)	yjzB	3806347..3806577 (-)	231	WP_080265337.1	spore coat protein YjzB	-
MK848_RS19545 (MK848_19505)	fabH	3806742..3807680 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
MK848_RS19550 (MK848_19510)	fabF	3807703..3808944 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
MK848_RS19555 (MK848_19515)	yjaZ	3809020..3809805 (+)	786	WP_069322523.1	DUF2268 domain-containing protein	-
MK848_RS19560 (MK848_19520)	appD	3809997..3810983 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=660467 MK848_RS19530 WP_014476425.1 3805158..3806111(+) (med) [Bacillus subtilis strain S1]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=660467 MK848_RS19530 WP_014476425.1 3805158..3806111(+) (med) [Bacillus subtilis strain S1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997