Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG622_RS21255 Genome accession   NZ_CP108394
Coordinates   4857141..4858265 (+) Length   374 a.a.
NCBI ID   WP_371578134.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01314     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4852141..4863265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG622_RS21245 (OG622_21305) - 4853989..4855374 (+) 1386 WP_371578131.1 alpha/beta hydrolase -
  OG622_RS21250 (OG622_21310) radA/sms 4855650..4857059 (+) 1410 WP_371578132.1 DNA repair protein RadA Machinery gene
  OG622_RS21255 (OG622_21315) disA 4857141..4858265 (+) 1125 WP_371578134.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG622_RS21260 (OG622_21320) - 4858369..4859208 (-) 840 WP_371578136.1 hypothetical protein -
  OG622_RS21265 (OG622_21325) - 4859510..4860580 (+) 1071 WP_371578138.1 LLM class flavin-dependent oxidoreductase -
  OG622_RS21270 (OG622_21330) - 4860664..4861581 (+) 918 WP_371578140.1 A/G-specific adenine glycosylase -
  OG622_RS21275 (OG622_21335) - 4861912..4862463 (+) 552 WP_371578142.1 SigE family RNA polymerase sigma factor -
  OG622_RS21280 (OG622_21340) - 4862451..4863125 (+) 675 WP_371578144.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40165.03 Da        Isoelectric Point: 5.1026

>NTDB_id=660146 OG622_RS21255 WP_371578134.1 4857141..4858265(+) (disA) [Streptomyces sp. NBC_01314]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVEPMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSTDLSKILRAGVQLVPDPMIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLVALYVDGHRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALRELDALAHAELLELPTVARALGYTGSPEGMDSAVSPRGYRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=660146 OG622_RS21255 WP_371578134.1 4857141..4858265(+) (disA) [Streptomyces sp. NBC_01314]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCCCCAGGCACGGCCCTGCGCGACGGGCTTGAGCGGATTCTCCGCGGCAACACGGGCGGGCTCATCGTGC
TCGGCTTCGACAAGACCGTCGAGCCGATGTGCACCGGTGGATTCGTCCTGGATGTCGAGTTCACGGCCACGCGTCTGCGT
GAGCTGTGCAAGCTCGACGGCGGAATCGTCCTGTCCACGGACCTCTCCAAGATCCTCCGGGCGGGCGTCCAACTGGTCCC
CGACCCGATGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACGGCCGACCGCGTGAGCAAGCAGGTCGGGTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGGTCGCGCTGTACGTCGACGGCCACCGGCGCGTACTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTGGCGGGCACCCTGTC
CGCACTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGTCGGCGGTCGCCCAGCGACTGGAGATGGTCCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGCCGCCTTCTGGCCCTCCAGCTCGACGAGCTGATCGCG
GGCGTCGAACCGGAACGCGAGCTGGTCGTCCGCGACTACGTCCCGGAACCCACCGCCAAACGCTCCCGCACGGTCGACGA
GGCCCTCCGCGAGCTCGACGCCCTCGCCCACGCCGAGCTCCTCGAACTCCCCACGGTCGCCCGCGCCCTCGGCTACACCG
GCTCCCCCGAGGGCATGGACTCCGCGGTCTCCCCGCGCGGCTACCGCCTCCTGGCCAAGGTCCCCCGCCTCCCGGGCGCC
ATCATCGACCGGCTCGTCGAACACTTCGGCGGTCTCCAGAAACTCCTCGCCGCCAGCGTCGACGACCTGCAGACGGTCGA
CGGAGTGGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTGTCGCGCCTGGCGGAGTCGTCGATCCTGGAGCGTTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433