Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   MKF36_RS01925 Genome accession   NZ_CP092750
Coordinates   372898..373017 (+) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain KS04AU     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 367898..378017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKF36_RS01910 (MKF36_01910) - 369510..370193 (+) 684 WP_042634825.1 response regulator transcription factor -
  MKF36_RS01915 (MKF36_01915) - 370180..371613 (+) 1434 WP_162183162.1 HAMP domain-containing sensor histidine kinase -
  MKF36_RS01920 (MKF36_01920) rapC 371766..372914 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  MKF36_RS01925 (MKF36_01925) phrC 372898..373017 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  MKF36_RS01930 (MKF36_01930) - 373165..373260 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  MKF36_RS01935 (MKF36_01935) - 373355..374719 (-) 1365 WP_042634827.1 aspartate kinase -
  MKF36_RS01940 (MKF36_01940) ceuB 375133..376086 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  MKF36_RS01945 (MKF36_01945) - 376076..377023 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  MKF36_RS01950 (MKF36_01950) - 377017..377775 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=659996 MKF36_RS01925 WP_003156334.1 372898..373017(+) (phrC) [Bacillus velezensis strain KS04AU]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=659996 MKF36_RS01925 WP_003156334.1 372898..373017(+) (phrC) [Bacillus velezensis strain KS04AU]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718