Detailed information NTG0659995

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: MKF36_RS01920
• Genome accession: NZ_CP092750
• Coordinates: 371766..372914 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain KS04AU
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 366766..377914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKF36_RS01900 (MKF36_01900)	-	367187..367870 (-)	684	WP_042634822.1	ABC transporter ATP-binding protein	-
MKF36_RS01905 (MKF36_01905)	-	367885..369297 (-)	1413	WP_149061571.1	ABC transporter permease	-
MKF36_RS01910 (MKF36_01910)	-	369510..370193 (+)	684	WP_042634825.1	response regulator transcription factor	-
MKF36_RS01915 (MKF36_01915)	-	370180..371613 (+)	1434	WP_162183162.1	HAMP domain-containing sensor histidine kinase	-
MKF36_RS01920 (MKF36_01920)	rapC	371766..372914 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
MKF36_RS01925 (MKF36_01925)	phrC	372898..373017 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
MKF36_RS01930 (MKF36_01930)	-	373165..373260 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
MKF36_RS01935 (MKF36_01935)	-	373355..374719 (-)	1365	WP_042634827.1	aspartate kinase	-
MKF36_RS01940 (MKF36_01940)	ceuB	375133..376086 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
MKF36_RS01945 (MKF36_01945)	-	376076..377023 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
MKF36_RS01950 (MKF36_01950)	-	377017..377775 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=659995 MKF36_RS01920 WP_007410270.1 371766..372914(+) (rapC) [Bacillus velezensis strain KS04AU]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=659995 MKF36_RS01920 WP_007410270.1 371766..372914(+) (rapC) [Bacillus velezensis strain KS04AU]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568