Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   MK801_RS02545 Genome accession   NZ_CP092748
Coordinates   496622..497323 (+) Length   233 a.a.
NCBI ID   WP_004255173.1    Uniprot ID   S6FFV7
Organism   Lactococcus lactis strain 17M1     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 491622..502323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MK801_RS02530 (MK801_02530) - 494016..494924 (+) 909 WP_003130548.1 diacylglycerol kinase family protein -
  MK801_RS02535 (MK801_02535) - 495072..495758 (+) 687 WP_004255158.1 amino acid ABC transporter permease -
  MK801_RS02540 (MK801_02540) - 495758..496492 (+) 735 WP_254255654.1 amino acid ABC transporter ATP-binding protein -
  MK801_RS02545 (MK801_02545) mecA 496622..497323 (+) 702 WP_004255173.1 adaptor protein MecA Regulator
  MK801_RS02550 (MK801_02550) - 497326..498657 (+) 1332 WP_015426955.1 glycosyltransferase family 4 protein -
  MK801_RS02555 (MK801_02555) sufC 498833..499603 (+) 771 WP_254255655.1 Fe-S cluster assembly ATPase SufC -
  MK801_RS02560 (MK801_02560) sufD 499741..500997 (+) 1257 WP_015426954.1 Fe-S cluster assembly protein SufD -
  MK801_RS02565 (MK801_02565) - 500997..502214 (+) 1218 WP_057720738.1 cysteine desulfurase -

Sequence


Protein


Download         Length: 233 a.a.        Molecular weight: 27077.46 Da        Isoelectric Point: 4.1246

>NTDB_id=659961 MK801_RS02545 WP_004255173.1 496622..497323(+) (mecA) [Lactococcus lactis strain 17M1]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=659961 MK801_RS02545 WP_004255173.1 496622..497323(+) (mecA) [Lactococcus lactis strain 17M1]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTTCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTTGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATTGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB S6FFV7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.571

100

0.996

  mecA Lactococcus lactis subsp. cremoris KW2

96.996

100

0.97