Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG395_RS30135 Genome accession   NZ_CP108390
Coordinates   6620606..6621730 (-) Length   374 a.a.
NCBI ID   WP_327245732.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01320     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6615606..6626730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG395_RS30110 (OG395_30085) - 6615935..6616696 (-) 762 WP_327245728.1 hypothetical protein -
  OG395_RS30115 (OG395_30090) - 6616684..6617334 (-) 651 WP_327245729.1 SigE family RNA polymerase sigma factor -
  OG395_RS30120 (OG395_30095) - 6617679..6618581 (-) 903 WP_327245730.1 A/G-specific adenine glycosylase -
  OG395_RS30125 (OG395_30100) - 6618880..6619611 (-) 732 Protein_5974 phosphatase PAP2 family protein -
  OG395_RS30130 (OG395_30105) - 6619568..6620374 (+) 807 WP_327245731.1 hypothetical protein -
  OG395_RS30135 (OG395_30110) disA 6620606..6621730 (-) 1125 WP_327245732.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG395_RS30140 (OG395_30115) radA/sms 6621811..6623223 (-) 1413 WP_327245733.1 DNA repair protein RadA Machinery gene
  OG395_RS30145 (OG395_30120) - 6623392..6625290 (+) 1899 WP_327245734.1 hypothetical protein -
  OG395_RS30150 (OG395_30125) - 6625315..6626196 (-) 882 WP_327245735.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40362.27 Da        Isoelectric Point: 4.9372

>NTDB_id=659925 OG395_RS30135 WP_327245732.1 6620606..6621730(-) (disA) [Streptomyces sp. NBC_01320]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMSKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=659925 OG395_RS30135 WP_327245732.1 6620606..6621730(-) (disA) [Streptomyces sp. NBC_01320]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGCT
GAGCGCCGTCGCGCCCGGAATGGCCTTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGCGGGCTGATCGTGC
TGGGCATGGACAAGACCGTCGAGTCCATGTGCACCGGCGGCTTCGTGCTGGATGTCGAGTTCACCGCGACGCGACTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGAGCAAGATTCTTCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCTG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTGTCGCGCGCCAATCAGGCCCTCGCCACTCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTGGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGATGTGACGGCTGTCGCACAGCGGCTGGAGATGGTGCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTTCTCTCGCTCCAGCTCGACGAGTTGATCGCA
GGCGTCGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTATGTGCCGGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCGGA
GGCGCTGACCGAGCTGGACGCGCTCTCTCACACCGAGTTGCTCGAACTCCCCGTCGTGGCACGGGCCCTGGGGTACAGCG
GCTCACCCGAAACCCTGGACTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGACTGCCCGGGGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGAGGACTGCAGAAGCTGCTCGCGGCGAGCGTGGACGATCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCGCGGAGCGTGCGCGAGGGGCTCTCGCGGCTGGCCGAGTCGTCGATTCTCGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436