Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MKW31_RS14880 Genome accession   NZ_CP092715
Coordinates   3066465..3067109 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain 37-1     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3061465..3072109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKW31_RS14845 (MKW31_14795) - 3062650..3063081 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  MKW31_RS14850 (MKW31_14800) - 3063081..3063422 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  MKW31_RS14855 (MKW31_14805) - 3063415..3064896 (+) 1482 WP_007408671.1 Na+/H+ antiporter subunit D -
  MKW31_RS14860 (MKW31_14810) - 3064902..3065378 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  MKW31_RS14865 (MKW31_14815) - 3065378..3065662 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  MKW31_RS14870 (MKW31_14820) mnhG 3065646..3066020 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  MKW31_RS14875 (MKW31_14825) - 3066060..3066443 (-) 384 WP_032869799.1 hotdog fold thioesterase -
  MKW31_RS14880 (MKW31_14830) comA 3066465..3067109 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  MKW31_RS14885 (MKW31_14835) comP 3067190..3069499 (-) 2310 WP_033574914.1 histidine kinase Regulator
  MKW31_RS14890 (MKW31_14840) comX 3069519..3069695 (-) 177 WP_007408675.1 competence pheromone ComX -
  MKW31_RS14895 (MKW31_14845) comQ 3069695..3070633 (-) 939 WP_020954300.1 polyprenyl synthetase family protein Regulator
  MKW31_RS14900 (MKW31_14850) degQ 3070764..3070904 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  MKW31_RS14905 (MKW31_14855) - 3071370..3071711 (+) 342 WP_007408677.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=659862 MKW31_RS14880 WP_003152052.1 3066465..3067109(-) (comA) [Bacillus velezensis strain 37-1]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=659862 MKW31_RS14880 WP_003152052.1 3066465..3067109(-) (comA) [Bacillus velezensis strain 37-1]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
TGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAACAAGCTGAATGTCGGCTCCCGAACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864