Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG384_RS16225 Genome accession   NZ_CP108385
Coordinates   3553000..3554124 (+) Length   374 a.a.
NCBI ID   WP_327337597.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01324     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3548000..3559124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG384_RS16210 (OG384_16210) - 3548428..3549267 (+) 840 WP_327337595.1 hypothetical protein -
  OG384_RS16215 (OG384_16215) - 3549344..3551218 (-) 1875 WP_327337596.1 hypothetical protein -
  OG384_RS16220 (OG384_16220) radA/sms 3551463..3552875 (+) 1413 WP_073733698.1 DNA repair protein RadA Machinery gene
  OG384_RS16225 (OG384_16225) disA 3553000..3554124 (+) 1125 WP_327337597.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG384_RS16230 (OG384_16230) - 3554198..3555046 (-) 849 WP_327337598.1 hypothetical protein -
  OG384_RS16235 (OG384_16235) - 3555331..3556233 (+) 903 WP_073733696.1 A/G-specific adenine glycosylase -
  OG384_RS16240 (OG384_16240) - 3556459..3557097 (+) 639 WP_327340623.1 SigE family RNA polymerase sigma factor -
  OG384_RS16245 (OG384_16245) - 3557085..3557828 (+) 744 WP_327337599.1 hypothetical protein -
  OG384_RS16250 (OG384_16250) cseB 3557839..3558546 (+) 708 WP_327337600.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40422.34 Da        Isoelectric Point: 5.2177

>NTDB_id=659747 OG384_RS16225 WP_327337597.1 3553000..3554124(+) (disA) [Streptomyces sp. NBC_01324]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCSFPVVSVSQSMHLIALYVHGQRRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTARRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=659747 OG384_RS16225 WP_327337597.1 3553000..3554124(+) (disA) [Streptomyces sp. NBC_01324]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAGGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAATTCACCGCGACCCGGCTGCGA
GAGCTGGCCAAGCTCGACGGGGCGTTGATCCTCGACAAGGACATGACCAAGATCCTGCGCGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCCGGCAGTGCAGTTTCCCGG
TGGTCTCGGTATCGCAGTCGATGCACCTGATCGCGCTGTACGTGCACGGGCAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCGCGCGCCAACCAGGCCCTCGCCACTCTGGAGCGCTACAAGCTCCGGCTCGACGAGGTCGCCGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGACGGCCGTCGCGCAGCGTCTTGAGATGGTGCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTCCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTACGTGCCGGAGCCGACCGCCAGGCGGTCGCGCACGGTGGCGGA
GGCGCTCACCGAGCTGGACGCGCTGTCCCACACCGAGCTGCTCGAACTGCCCGTCGTGGCGCGGGCCCTGGGTTACAGCG
GCTCCCCCGAGACGCTGGACTCCGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCGAGCGTGGACGATCTCCAGACGGTGGA
CGGGGTCGGGGAGGCGCGGGCGCGCAGTGTGCGCGAGGGCCTGTCGCGGCTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433