Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG599_RS19245 Genome accession   NZ_CP108370
Coordinates   4475948..4477072 (-) Length   374 a.a.
NCBI ID   WP_327177206.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01335     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4470948..4482072
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG599_RS19225 (OG599_19245) - 4472158..4472517 (-) 360 WP_327177202.1 trypco2 family protein -
  OG599_RS19230 (OG599_19250) - 4472992..4473699 (+) 708 WP_327177203.1 M23 family metallopeptidase -
  OG599_RS19235 (OG599_19255) - 4473849..4474754 (-) 906 WP_327177204.1 A/G-specific adenine glycosylase -
  OG599_RS19240 (OG599_19260) - 4475019..4475849 (+) 831 WP_327177205.1 hypothetical protein -
  OG599_RS19245 (OG599_19265) disA 4475948..4477072 (-) 1125 WP_327177206.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG599_RS19250 (OG599_19270) radA/sms 4477153..4478565 (-) 1413 WP_327177208.1 DNA repair protein RadA Machinery gene
  OG599_RS19255 (OG599_19275) - 4478650..4479486 (+) 837 WP_327177209.1 class I SAM-dependent methyltransferase -
  OG599_RS19260 (OG599_19280) - 4479766..4481868 (+) 2103 WP_327177210.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40273.15 Da        Isoelectric Point: 5.0196

>NTDB_id=659697 OG599_RS19245 WP_327177206.1 4475948..4477072(-) (disA) [Streptomyces sp. NBC_01335]
MAANDRASSPGKSGQGTGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVMNVEFAATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKSCGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRARTVAEALTELDALSHSELLELAVVARSLGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IMERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=659697 OG599_RS19245 WP_327177206.1 4475948..4477072(-) (disA) [Streptomyces sp. NBC_01335]
GTGGCAGCCAACGACCGGGCATCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAAGCGCTGATGCGCGCTTCGCT
GAGCGCGGTCGCGCCCGGAACGGCCCTGCGTGACGGGCTGGAGCGCATCCTGCGGGGGAACACCGGCGGGCTGATCGTCC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGTTTCGTGATGAACGTCGAGTTCGCCGCGACCCGTCTGCGC
GAGCTGTGCAAGCTCGACGGTGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGCTCGTCCC
GGACGCCTCGATCCCCACCGAGGAGACCGGTACCCGTCACCGCACGGCCGACCGCGTCTCCAAGTCGTGCGGTTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTCGACGGCGAGCGGCGGGTGCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGCGCCAACCAGGCCCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CGACGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGACGCCTGCTGTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGGGAGCTCGTCGTACGCGACTACGTCCCCGAGCCAACGGCGAAGCGTGCGCGCACGGTCGCCGA
GGCGCTGACCGAGCTGGACGCGCTGAGCCACTCCGAGCTGCTCGAACTCGCCGTGGTGGCGAGGTCGCTGGGGTACAGCG
GTTCGCCCGAGACGCTGGACTCGGCCGTCTCCCCGCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATGGAGCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCGAGCGTGGACGACCTCCAGACCGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTCCGCGAGGGCCTCTCCCGCCTCGCCGAGTCCTCGATCCTGGAACGGTACG
TCTGA

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441