Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG585_RS25195 Genome accession   NZ_CP108365
Coordinates   5562888..5564012 (-) Length   374 a.a.
NCBI ID   WP_266584576.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01340     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5557888..5569012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG585_RS25170 (OG585_25190) cseB 5558604..5559308 (-) 705 WP_266627242.1 two-component system response regulator CseB -
  OG585_RS25175 (OG585_25195) - 5559328..5559945 (-) 618 WP_323138246.1 hypothetical protein -
  OG585_RS25180 (OG585_25200) - 5559966..5560505 (-) 540 WP_060898668.1 SigE family RNA polymerase sigma factor -
  OG585_RS25185 (OG585_25205) - 5560777..5561700 (-) 924 WP_323138159.1 A/G-specific adenine glycosylase -
  OG585_RS25190 (OG585_25210) - 5561970..5562782 (+) 813 WP_327137348.1 hypothetical protein -
  OG585_RS25195 (OG585_25215) disA 5562888..5564012 (-) 1125 WP_266584576.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG585_RS25200 (OG585_25220) radA/sms 5564092..5565501 (-) 1410 WP_266437784.1 DNA repair protein RadA Machinery gene
  OG585_RS25205 (OG585_25225) - 5565709..5567484 (+) 1776 WP_327138105.1 hypothetical protein -
  OG585_RS25210 (OG585_25230) - 5567536..5568396 (-) 861 WP_266649056.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40079.84 Da        Isoelectric Point: 5.0897

>NTDB_id=659542 OG585_RS25195 WP_266584576.1 5562888..5564012(-) (disA) [Streptomyces sp. NBC_01340]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVDFTATRLR
ELCKLDGGIVVDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPGPTAKRSRTVDEALSDLNALAHSELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGT
IIDRLVEHFGSLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=659542 OG585_RS25195 WP_266584576.1 5562888..5564012(-) (disA) [Streptomyces sp. NBC_01340]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCATT
GAGCGCCGTGGCACCTGGCACGGCCCTGCGCGACGGGCTCGAGAGAATCCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACGGGCGGCTTCGTCCTGGACGTCGACTTCACGGCGACCCGGTTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTTGTCGACAAGGACATCACCAAGATCCTTCGGGCCGGCGTCCAGCTGGTGCC
CGACCCGACGATCCCGACGGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGTCTGATCGCGCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCCCGTGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGCGACGTGTCGGCGGTGGCGCAGCGCCTGGAGATGGTGCGGCGCATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGTTGGGCACGGACGGGCGTCTGCTCGCCCTCCAGCTGGACGAGTTGATCGCC
GGCGTGGAGCCCGAGCGGGAGCTGGTGGTCCGGGACTACGTGCCGGGGCCGACCGCGAAGCGTTCCCGCACGGTCGACGA
GGCTCTCTCCGACCTGAACGCCCTGGCCCACTCCGAGCTGCTCGAACTGCCCACGGTGGCGAGAGCCTTGGGCTACACCG
GCTCCCCCGAGGCGCTCGACTCCGCGGTCTCCCCGCGCGGTTTCCGCCTCCTCGCCAAGGTTCCGCGTCTGCCCGGCACG
ATCATCGACCGTCTCGTGGAGCACTTCGGCAGTCTGCAGAAGCTCCTCGCCGCGAGCGTCGACGACCTGCAGGCGGTCGA
CGGGGTGGGCGAGGCGCGGGCGCGCAGCGTCCGTGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.321

96.524

0.428