Detailed information NTG0659516

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG585_RS15300
• Genome accession: NZ_CP108365
• Coordinates: 3373456..3374742 (-)
• Length: 428 a.a.
• NCBI ID: WP_054231969.1
• Uniprot ID: A0ABU3UTX5
• Organism: Streptomyces sp. NBC_01340
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3368456..3379742

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG585_RS15290 (OG585_15300)	-	3369617..3372247 (-)	2631	WP_266624700.1	valine--tRNA ligase	-
OG585_RS15295 (OG585_15305)	-	3372384..3373346 (+)	963	WP_327136966.1	hypothetical protein	-
OG585_RS15300 (OG585_15310)	clpX	3373456..3374742 (-)	1287	WP_054231969.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG585_RS15305 (OG585_15315)	clpP	3374914..3375594 (-)	681	WP_266624702.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG585_RS15310 (OG585_15320)	clpP	3375732..3376337 (-)	606	WP_266421778.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG585_RS15315 (OG585_15325)	tig	3376768..3378174 (-)	1407	WP_266624703.1	trigger factor	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46778.62 Da
• Isoelectric Point: 4.8201

>NTDB_id=659516 OG585_RS15300 WP_054231969.1 3373456..3374742(-) (clpX) [Streptomyces sp. NBC_01340]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
PALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=659516 OG585_RS15300 WP_054231969.1 3373456..3374742(-) (clpX) [Streptomyces sp. NBC_01340]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTATACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAACTCCCGAAACCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAGGCCCTCTCAGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAGAACCG
GGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACTCTGCTCGCCCAGA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGAGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTGGAGGGCACGACGGCCTCCGTTCCGCCCCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTCGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGACTGCCCGTCATCACCTCGGTCCACAACCTCGACCGG
CCGGCGCTCCTCCAGATCCTCGTGGAGCCGCGCAACGCGCTCGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTTCCCTCGCGCAAGGACGTGGCGAGGGTCGTCATCACG
GCGGACGTGGTCCTGTCCAACGTCAACCCGACGCTGATCCCGCGTGACGCCCGCGGGCGTGGCCCGGGTGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521