Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG311_RS21165 Genome accession   NZ_CP108362
Coordinates   4629668..4630792 (-) Length   374 a.a.
NCBI ID   WP_030158457.1    Uniprot ID   A0A5J6J8K2
Organism   Streptomyces sp. NBC_01343     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4624668..4635792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG311_RS21135 (OG311_21165) cseB 4624799..4625512 (-) 714 WP_229337382.1 two-component system response regulator CseB -
  OG311_RS21140 (OG311_21170) - 4625534..4626172 (-) 639 WP_229337380.1 hypothetical protein -
  OG311_RS21145 (OG311_21175) - 4626211..4626783 (-) 573 WP_030867865.1 SigE family RNA polymerase sigma factor -
  OG311_RS21150 (OG311_21180) - 4626964..4627929 (-) 966 WP_327133044.1 A/G-specific adenine glycosylase -
  OG311_RS21155 (OG311_21185) - 4627952..4628575 (-) 624 WP_327133045.1 phosphatase PAP2 family protein -
  OG311_RS21160 (OG311_21190) - 4628745..4629530 (+) 786 WP_327135656.1 hypothetical protein -
  OG311_RS21165 (OG311_21195) disA 4629668..4630792 (-) 1125 WP_030158457.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG311_RS21170 (OG311_21200) radA/sms 4630945..4632348 (-) 1404 WP_229337367.1 DNA repair protein RadA Machinery gene
  OG311_RS21175 (OG311_21205) - 4632569..4634386 (+) 1818 WP_327133046.1 hypothetical protein -
  OG311_RS21180 (OG311_21210) - 4634407..4635246 (-) 840 WP_327133047.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40303.32 Da        Isoelectric Point: 5.1189

>NTDB_id=659405 OG311_RS21165 WP_030158457.1 4629668..4630792(-) (disA) [Streptomyces sp. NBC_01343]
MAAKDGAAAPGKSGASSKHDALMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKAVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELAIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=659405 OG311_RS21165 WP_030158457.1 4629668..4630792(-) (disA) [Streptomyces sp. NBC_01343]
GTGGCAGCCAAGGACGGGGCAGCAGCACCCGGGAAGTCCGGCGCGAGCTCCAAGCACGACGCGCTGATGCGCGCCTCGCT
GAGTGCGGTCGCCCCCGGTCAGCCCCTGCGCGACGGGCTGGAGCGGATCGTCCGGGGCAACACCGGCGGCCTGATCGTCC
TCGGCATGGACAAGGCCGTCGAGGCCATGTGCACGGGCGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGAGCGCTGATCCTGGACAAGGACCTCACCAAGATCCTGCGGGCCGGCGTCCAGCTGGTGCC
GGACGCGTCGATCCCGACGGAGGAGACGGGCACCCGTCACCGCACCGCGGACCGCGTCTCGAAGCAGTGCGGTTTCCCCG
TCGTCTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCACTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCCGGGACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTGCGCCGCATTG
CCACGGAAATCGCTGAATACGTGGTCGAGCTGGGCACGGACGGGCGACTGCTGTCACTCCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGGGAGCTGGTGATCCGGGACTACGTTCCGGAGCCGACCGCGAAGCGCTCGCGCACGGTCGAGGA
GGCGCTGCCGGCACTGGACGCGCTGACGCACCCGGAGCTGCTGGAGCTGGCGATCGTGGCGCGGGCGCTGGGGTACACGG
GCTCGCCCGAGACGCTGGACTCCGCGGTGTCCCCGCGCGGGTACCGGCTGCTGGCGAAGGTCCCGCGGCTGCCGGGGGCC
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGCCTGCAGAAGCTGCTGGCCGCGAGTGTCGACGACCTCCAGGCCGTGGA
CGGCGTCGGCGAGGCCCGTGCGCGCAGCGTCCGCGAGGGGCTCTCCCGCCTCGCGGAGTCCTCGATCCTCGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5J6J8K2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441