Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | MKS87_RS13450 | Genome accession | NZ_CP092631 |
| Coordinates | 2579714..2580751 (-) | Length | 345 a.a. |
| NCBI ID | WP_173614185.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain YB-15 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2574714..2585751
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKS87_RS13400 (MKS87_13400) | tasA | 2574811..2575596 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| MKS87_RS13405 (MKS87_13405) | sipW | 2575660..2576232 (-) | 573 | WP_003246088.1 | signal peptidase I | - |
| MKS87_RS13410 (MKS87_13410) | tapA | 2576216..2576977 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKS87_RS13415 (MKS87_13415) | yqzG | 2577249..2577575 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| MKS87_RS13420 (MKS87_13420) | spoIIT | 2577617..2577796 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| MKS87_RS13425 (MKS87_13425) | comGG | 2577868..2578242 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| MKS87_RS13430 (MKS87_13430) | comGF | 2578243..2578626 (-) | 384 | WP_029317913.1 | ComG operon protein ComGF | Machinery gene |
| MKS87_RS13435 (MKS87_13435) | comGE | 2578652..2578999 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| MKS87_RS13440 (MKS87_13440) | comGD | 2578983..2579414 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| MKS87_RS13445 (MKS87_13445) | comGC | 2579404..2579700 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| MKS87_RS13450 (MKS87_13450) | comGB | 2579714..2580751 (-) | 1038 | WP_173614185.1 | comG operon protein ComGB | Machinery gene |
| MKS87_RS13455 (MKS87_13455) | comGA | 2580738..2581808 (-) | 1071 | WP_069322755.1 | competence protein ComGA | Machinery gene |
| MKS87_RS13460 (MKS87_13460) | corA | 2582219..2583172 (-) | 954 | WP_029317911.1 | magnesium transporter CorA | - |
| MKS87_RS13465 (MKS87_13465) | yqhB | 2583315..2584643 (+) | 1329 | WP_173614186.1 | hemolysin family protein | - |
| MKS87_RS13470 (MKS87_13470) | rsbRD | 2584696..2585532 (-) | 837 | WP_173614187.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39764.14 Da Isoelectric Point: 9.5257
>NTDB_id=659364 MKS87_RS13450 WP_173614185.1 2579714..2580751(-) (comGB) [Bacillus subtilis strain YB-15]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFDFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFDFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=659364 MKS87_RS13450 WP_173614185.1 2579714..2580751(-) (comGB) [Bacillus subtilis strain YB-15]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCGCGTTCAACCGATATGCTTTTTGATTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCGCGTTCAACCGATATGCTTTTTGATTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |