Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG252_RS23145 Genome accession   NZ_CP108354
Coordinates   4998762..4999886 (+) Length   374 a.a.
NCBI ID   WP_030043389.1    Uniprot ID   A0ABP7SSC1
Organism   Streptomyces sp. NBC_01352     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4993762..5004886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG252_RS23130 (OG252_23135) - 4994430..4995296 (+) 867 WP_329338362.1 hypothetical protein -
  OG252_RS23135 (OG252_23140) - 4995300..4997042 (-) 1743 WP_329338364.1 hypothetical protein -
  OG252_RS23140 (OG252_23145) radA 4997272..4998681 (+) 1410 WP_266435701.1 DNA repair protein RadA Machinery gene
  OG252_RS23145 (OG252_23150) disA 4998762..4999886 (+) 1125 WP_030043389.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG252_RS23150 (OG252_23155) - 4999950..5000795 (-) 846 WP_266435707.1 hypothetical protein -
  OG252_RS23155 (OG252_23160) - 5001200..5001853 (-) 654 WP_329338368.1 histidine kinase -
  OG252_RS23160 (OG252_23165) - 5001986..5002885 (+) 900 WP_266448217.1 A/G-specific adenine glycosylase -
  OG252_RS23165 (OG252_23170) - 5003111..5003659 (+) 549 WP_266435710.1 SigE family RNA polymerase sigma factor -
  OG252_RS23170 (OG252_23175) - 5003782..5004366 (+) 585 WP_323185990.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40116.88 Da        Isoelectric Point: 4.9235

>NTDB_id=659210 OG252_RS23145 WP_030043389.1 4998762..4999886(+) (disA) [Streptomyces sp. NBC_01352]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTPLRDGLERVLRGNTGGLMVLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALYELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=659210 OG252_RS23145 WP_030043389.1 4998762..4999886(+) (disA) [Streptomyces sp. NBC_01352]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGCGGGAGTTCCGGTGCCGATGGCCTCATGCGCGCCTCGCT
GAGCGCCGTGGCACCCGGCACGCCCCTGCGCGACGGCCTTGAGCGGGTCCTGCGCGGCAACACCGGCGGCCTCATGGTGC
TCGGCTCCGACAAGACCGTCGAATCGATGTGTACGGGCGGTTTCGTCCTGGATGTCGAGTTCACGGCAACGCGACTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCCTCCGACCTGTCGAAGATCCTCCGGGCCGGCGTCCAGCTGCTCCC
CGACCCGACGATCCCCACGGAAGAGACGGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCCCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCTGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTTGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTGGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCTCGGCCGTGGCCCAGCGTCTGGAGATGGTCCGCCGCATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTCGGCACGGACGGACGTCTCCTGGCCCTCCAGCTCGACGAGTTGATCGCC
GGCGTGGAGCCCGAGCGCGAACTGGTCGTGCGGGACTACGTCCCCGAGCCCACGGCCAAGCGCTCCCGCACGGTCGAGGA
GGCGCTGTACGAGCTCGACGCGCTCTCCCACGCCGAGCTCCTCGAACTGCCCACGGTGGCACGGGCGTTGGGCTACACGG
GGTCGCCGGAGGCGCTGGACTCGGCGGTGTCGCCGCGGGGCTTCCGACTGCTGGCGAAGGTGCCCCGCCTTCCGGGTGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCCGCGAGCGTGGACGACCTGCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCGCGGAGCGTGCGCGAGGGGCTTTCGCGACTGGCGGAGTCCTCGATCCTGGAGCGTTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444