Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG613_RS25860 Genome accession   NZ_CP108306
Coordinates   5834606..5835730 (-) Length   374 a.a.
NCBI ID   WP_020132463.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00015     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5829606..5840730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG613_RS25835 (OG613_25825) cseB 5830049..5830750 (-) 702 WP_267019040.1 two-component system response regulator CseB -
  OG613_RS25840 (OG613_25830) - 5831048..5831707 (-) 660 WP_267019039.1 hypothetical protein -
  OG613_RS25845 (OG613_25835) - 5831692..5832234 (-) 543 WP_020132466.1 SigE family RNA polymerase sigma factor -
  OG613_RS25850 (OG613_25840) - 5832535..5833467 (-) 933 WP_267019038.1 A/G-specific adenine glycosylase -
  OG613_RS25855 (OG613_25845) - 5833728..5834582 (+) 855 WP_405967638.1 hypothetical protein -
  OG613_RS25860 (OG613_25850) disA 5834606..5835730 (-) 1125 WP_020132463.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG613_RS25865 (OG613_25855) radA/sms 5835811..5837220 (-) 1410 WP_020132462.1 DNA repair protein RadA Machinery gene
  OG613_RS25870 (OG613_25860) - 5837496..5839259 (+) 1764 WP_405967639.1 BACON domain-containing protein -
  OG613_RS25875 (OG613_25865) - 5839383..5840261 (-) 879 WP_405967640.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39985.73 Da        Isoelectric Point: 4.9989

>NTDB_id=658607 OG613_RS25860 WP_020132463.1 5834606..5835730(-) (disA) [Streptomyces sp. NBC_00015]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFAATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPIVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELNALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=658607 OG613_RS25860 WP_020132463.1 5834606..5835730(-) (disA) [Streptomyces sp. NBC_00015]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTGCCGACGGCCTGATGCGCGCCGCGCT
GAGCGCGGTGGCCCCCGGCACGGCCCTGCGCGACGGCCTGGAGCGGATCCTTCGCGGCAACACCGGCGGACTCATCGTGC
TGGGCTCCGACAAGACGGTCGAGGCGATGTGCACGGGCGGGTTCGTCCTGGACGTGGAGTTCGCGGCCACGCGCCTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCGGACCTGTCGAAGATCCTCCGGGCCGGCGTCCAGCTGGTGCC
GGACCCCACGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGA
TCGTCTCCGTCTCCCAGTCCATGCGGCTGATCGCCCTGTACGTCGACGGCCAGCGCCGCGTTCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGGCGGCTGCTCGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGGTCCGGGACTACGTGCCCGAGCCCACGGCCAAGCGGTCCCGCACGGTCGACGA
GGCGCTGTACGAGCTGAACGCGCTCAGCCACGCCGAGCTCCTCGAACTGTCCACGGTGGCCCGCGCGTTGGGCTACACCG
GCTCTCCCGAGGCCCTCGATTCGGCGGTCTCGCCCCGCGGCTTCCGCCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGTCTCGTCGAGCACTTCGGCGGCCTCCAGAAGCTCCTCGCCGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGCGTGGGCGAGGCAAGGGCCCGGAGCGTCCGCGAGGGCCTGTCACGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438