Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHU89_RS28030 Genome accession   NZ_CP108302
Coordinates   5929863..5930987 (-) Length   374 a.a.
NCBI ID   WP_046263317.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00019     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5924863..5935987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU89_RS28005 (OHU89_27955) cseB 5925343..5926047 (-) 705 WP_046263313.1 two-component system response regulator CseB -
  OHU89_RS28010 (OHU89_27960) - 5926160..5926879 (-) 720 WP_405646829.1 hypothetical protein -
  OHU89_RS28015 (OHU89_27965) - 5926864..5927406 (-) 543 WP_046263315.1 SigE family RNA polymerase sigma factor -
  OHU89_RS28020 (OHU89_27970) - 5927643..5928578 (-) 936 WP_405646832.1 A/G-specific adenine glycosylase -
  OHU89_RS28025 (OHU89_27975) - 5928934..5929761 (+) 828 WP_405646835.1 hypothetical protein -
  OHU89_RS28030 (OHU89_27980) disA 5929863..5930987 (-) 1125 WP_046263317.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHU89_RS28035 (OHU89_27985) radA 5931069..5932478 (-) 1410 WP_266889267.1 DNA repair protein RadA Machinery gene
  OHU89_RS28040 (OHU89_27990) - 5932677..5934359 (+) 1683 WP_405646837.1 BACON domain-containing protein -
  OHU89_RS28045 (OHU89_27995) - 5934368..5935219 (-) 852 WP_405646839.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40161.90 Da        Isoelectric Point: 4.9201

>NTDB_id=658416 OHU89_RS28030 WP_046263317.1 5929863..5930987(-) (disA) [Streptomyces sp. NBC_00019]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVEPMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSTDGSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVDFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVLELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELNALTHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=658416 OHU89_RS28030 WP_046263317.1 5929863..5930987(-) (disA) [Streptomyces sp. NBC_00019]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGCCTCGAGCGGATTCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGTTTCGACAAGACCGTCGAGCCGATGTGCACGGGCGGTTTCGTCCTGGATGTCGAGTTCACGGCCACGCGTCTGCGT
GAGCTGTGCAAACTCGACGGCGGCATCGTGCTCTCCACGGACGGATCGAAGATCCTGCGGGCGGGTGTGCAACTGGTACC
CGACCCGACGATCCCCACGGAGGAGACGGGCACGCGCCACCGCACGGCGGACCGTGTCTCCAAGCAGGTCGACTTCCCGG
TGGTGTCGGTCTCCCAGTCCATGCGGCTGATCGCCCTCTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGAGCGAACCAGGCCCTGGCGACCCTTGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTCGTGACGGTCCGGGACGTGTCGGCGGTCGCCCAGCGCCTCGAGATGGTCCGCCGCATCG
CGACGGAGATCGCCGAGTACGTGCTCGAACTCGGCACCGACGGACGTCTCCTCGCCCTCCAGCTCGACGAGTTGATCGCC
GGCGTGGAGCCCGAGCGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCCACGGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTGTACGAGCTCAACGCCCTCACCCACGCCGAGCTCCTCGAACTGTCGACGGTGGCACGGGCCTTGGGCTACACCG
GCTCTCCGGAGGCGCTGGACTCCGCGGTCTCCCCGCGAGGCTTCCGTCTGCTGGCGAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGACCGTCTGGTGGAACACTTCGGCGGCCTGCAGAAGCTGCTGGCCGCGAGCGTGGACGACCTGCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCGAGGAGCGTGCGCGAAGGGCTGTCGCGGCTGGCGGAGAGCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441