Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG885_RS20325 Genome accession   NZ_CP108293
Coordinates   4562177..4563301 (+) Length   374 a.a.
NCBI ID   WP_399952036.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00028     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4557177..4568301
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG885_RS20310 (OG885_20250) - 4558032..4559729 (-) 1698 WP_405733547.1 BACON domain-containing protein -
  OG885_RS20315 (OG885_20255) - 4559918..4560604 (+) 687 WP_405733550.1 hypothetical protein -
  OG885_RS20320 (OG885_20260) radA/sms 4560685..4562094 (+) 1410 WP_405733553.1 DNA repair protein RadA Machinery gene
  OG885_RS20325 (OG885_20265) disA 4562177..4563301 (+) 1125 WP_399952036.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG885_RS20330 (OG885_20270) - 4563322..4564149 (-) 828 WP_405733556.1 hypothetical protein -
  OG885_RS20335 (OG885_20275) - 4564331..4565275 (+) 945 WP_405733559.1 A/G-specific adenine glycosylase -
  OG885_RS20340 (OG885_20280) - 4565512..4566054 (+) 543 WP_399952043.1 SigE family RNA polymerase sigma factor -
  OG885_RS20345 (OG885_20285) - 4566039..4566761 (+) 723 WP_405733563.1 hypothetical protein -
  OG885_RS20350 (OG885_20290) cseB 4566898..4567602 (+) 705 WP_329336337.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40145.90 Da        Isoelectric Point: 4.9235

>NTDB_id=658232 OG885_RS20325 WP_399952036.1 4562177..4563301(+) (disA) [Streptomyces sp. NBC_00028]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVEPMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSTDGSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALYELDALTHAELLELQTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=658232 OG885_RS20325 WP_399952036.1 4562177..4563301(+) (disA) [Streptomyces sp. NBC_00028]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGCCTGGAGCGGATTCTCCGCGGCAACACGGGCGGGCTCATCGTGC
TCGGATTCGACAAGACGGTGGAGCCGATGTGCACGGGCGGTTTCGTCCTGGACGTCGAGTTCACGGCCACGCGCCTGCGT
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTCTCCACGGACGGCTCGAAGATCCTGCGGGCCGGCGTCCAGCTGGTCCC
GGACCCGACGATCCCGACGGAGGAGACGGGCACCCGCCACCGCACGGCGGACCGTGTCTCCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGTCTGATCGCCCTCTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTCAGGGACGTCTCGGCGGTGGCCCAGCGTCTGGAGATGGTCCGCCGGATCG
CCACGGAGATCGCCGAGTACGTCGTCGAACTCGGCACCGACGGCCGCCTCCTGGCCCTCCAGCTCGACGAGCTGATCGCG
GGCGTCGAGCCGGAACGTGAGCTGGTCGTCCGGGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTGGAAGA
GGCCCTGTACGAACTCGACGCCCTCACCCACGCGGAGCTGCTCGAACTCCAGACGGTGGCAAGGGCGTTGGGCTACACGG
GTTCACCGGAGGCGTTGGACTCGGCGGTGTCCCCGCGGGGCTTCCGCCTCCTGGCCAAGGTCCCCCGTCTCCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCATTTCGGCGGCCTGCAGAAGCTCCTCGCGGCAAGCGTGGACGACTTGCAGACGGTCGA
CGGGGTCGGCGAGGCGAGGGCGAGGAGCGTCCGCGAGGGCCTGTCGAGGCTGGCGGAGAGCTCGATCCTGGAACGGTACG
TGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441