Detailed information NTG0658212

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: MJ920_RS16985
• Genome accession: NZ_CP092499
• Coordinates: 3428531..3429694 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain YC_89
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3423531..3434694

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MJ920_RS16955 (MJ920_16920)	-	3423796..3424215 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
MJ920_RS16960 (MJ920_16925)	comFC	3424289..3424978 (-)	690	WP_196769287.1	phosphoribosyltransferase family protein	Machinery gene
MJ920_RS16965 (MJ920_16930)	-	3424984..3425268 (-)	285	WP_003151389.1	competence protein ComFB	-
MJ920_RS16970 (MJ920_16935)	comFA	3425326..3426711 (-)	1386	WP_043867470.1	DEAD/DEAH box helicase	Machinery gene
MJ920_RS16975 (MJ920_16940)	-	3426819..3427667 (-)	849	WP_043867471.1	DegV family protein	-
MJ920_RS16980 (MJ920_16945)	degU	3427765..3428454 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
MJ920_RS16985 (MJ920_16950)	degS	3428531..3429694 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
MJ920_RS16990 (MJ920_16955)	-	3429917..3430564 (+)	648	WP_043867472.1	YigZ family protein	-
MJ920_RS16995 (MJ920_16960)	-	3430569..3431783 (+)	1215	WP_043867473.1	LCP family protein	-
MJ920_RS17000 (MJ920_16965)	-	3431873..3432949 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
MJ920_RS17005 (MJ920_16970)	-	3433082..3434278 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=658212 MJ920_RS16985 WP_003151385.1 3428531..3429694(-) (degS) [Bacillus velezensis strain YC_89]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=658212 MJ920_RS16985 WP_003151385.1 3428531..3429694(-) (degS) [Bacillus velezensis strain YC_89]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948