Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG374_RS23715 Genome accession   NZ_CP108287
Coordinates   5082487..5083611 (-) Length   374 a.a.
NCBI ID   WP_202200349.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00040     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5077487..5088611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG374_RS23690 (OG374_23555) cseB 5078294..5079007 (-) 714 WP_030727090.1 two-component system response regulator CseB -
  OG374_RS23695 (OG374_23560) - 5079037..5079669 (-) 633 WP_202203754.1 hypothetical protein -
  OG374_RS23700 (OG374_23565) - 5079705..5080265 (-) 561 WP_030010715.1 SigE family RNA polymerase sigma factor -
  OG374_RS23705 (OG374_23570) - 5080451..5081434 (-) 984 WP_389801273.1 A/G-specific adenine glycosylase -
  OG374_RS23710 (OG374_23575) - 5081662..5082468 (+) 807 WP_398428805.1 hypothetical protein -
  OG374_RS23715 (OG374_23580) disA 5082487..5083611 (-) 1125 WP_202200349.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG374_RS23720 (OG374_23585) radA/sms 5083823..5085235 (-) 1413 WP_202200348.1 DNA repair protein RadA Machinery gene
  OG374_RS23725 (OG374_23590) - 5085454..5087217 (+) 1764 WP_252309668.1 BACON domain-containing protein -
  OG374_RS23730 (OG374_23595) - 5087250..5088119 (-) 870 WP_202200346.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40380.33 Da        Isoelectric Point: 4.9472

>NTDB_id=657965 OG374_RS23715 WP_202200349.1 5082487..5083611(-) (disA) [Streptomyces sp. NBC_00040]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELAIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=657965 OG374_RS23715 WP_202200349.1 5082487..5083611(-) (disA) [Streptomyces sp. NBC_00040]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGTGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCTTGGAACGGATCGTCCGCGGCAACACCGGCGGGCTGATCGTCC
TCGGTATGGACAAGAGCGTCGAGGCGATGTGCACCGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACCTCACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTGCC
GGACGCGTCGATCCCGACGGAGGAGACGGGTACGCGGCACCGTACGGCGGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGCGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGAGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAGCTGGACGCGCTGACGCACCCGGAGCTGCTGGAGCTGGCGATCGTGGCGCGGGCGCTGGGGTACACGG
GCTCGCCGGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGAACGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTGCAGACGGTGGA
CGGGGTGGGCGAGGCCCGCGCCCGGAGCGTCCGCGAGGGACTGTCCCGGCTGGCCGAGTCGTCCATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444