Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MKD39_RS04810 Genome accession   NZ_CP092478
Coordinates   992841..993887 (+) Length   348 a.a.
NCBI ID   WP_011275375.1    Uniprot ID   A0A2A1K920
Organism   Staphylococcus haemolyticus strain CGMH-SH51     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 987841..998887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKD39_RS04785 (MKD39_04780) map 988701..989453 (+) 753 WP_011275369.1 type I methionyl aminopeptidase -
  MKD39_RS04790 (MKD39_04785) - 989578..990435 (-) 858 WP_011275370.1 SDR family oxidoreductase -
  MKD39_RS04795 (MKD39_04790) - 990507..991519 (-) 1013 Protein_947 HoxN/HupN/NixA family nickel/cobalt transporter -
  MKD39_RS04800 (MKD39_04795) - 991732..992118 (+) 387 WP_011275373.1 hypothetical protein -
  MKD39_RS04805 (MKD39_04800) liaF 992143..992844 (+) 702 WP_011275374.1 cell wall-active antibiotics response protein LiaF -
  MKD39_RS04810 (MKD39_04805) vraS 992841..993887 (+) 1047 WP_011275375.1 sensor histidine kinase Regulator
  MKD39_RS04815 (MKD39_04810) vraR 993877..994506 (+) 630 WP_011275376.1 two-component system response regulator VraR Regulator
  MKD39_RS04820 (MKD39_04815) - 994570..995781 (-) 1212 WP_011275377.1 YihY/virulence factor BrkB family protein -
  MKD39_RS04825 (MKD39_04820) - 995978..996262 (-) 285 WP_011275378.1 YtxH domain-containing protein -
  MKD39_RS04830 (MKD39_04825) - 996268..996732 (-) 465 WP_011275379.1 low molecular weight protein-tyrosine-phosphatase -
  MKD39_RS04835 (MKD39_04830) - 996874..997083 (+) 210 WP_011275380.1 DUF1128 domain-containing protein -
  MKD39_RS04840 (MKD39_04835) - 997097..998344 (+) 1248 WP_011275381.1 aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40179.58 Da        Isoelectric Point: 6.0550

>NTDB_id=657932 MKD39_RS04810 WP_011275375.1 992841..993887(+) (vraS) [Staphylococcus haemolyticus strain CGMH-SH51]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSILAYKINQQNQWIKS
QIEHAIEGETVGINDQNIELYNETIDLYQTLVPLNQELHRLRMKTQNLTNENYNMNDVKVKKIIENERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMVQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIHDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNQQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNREDDNNDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=657932 MKD39_RS04810 WP_011275375.1 992841..993887(+) (vraS) [Staphylococcus haemolyticus strain CGMH-SH51]
ATGAACCACTACTTAAGAGCTATCGGTTCAATGCTTATACTAGTTTATAGCATGTTAACCGCGTTCTTATTTATAGATAA
AGTATTTGTTAATATTATCTATTTCCAAGGTATGTTTTATACTCAAATTTTTGGGATACCTGTTTTTCTATTTTTAAATT
TAGTCATCATTTTACTTTGTATTATAGTAGGTTCAATTCTCGCATATAAAATTAATCAACAAAATCAGTGGATTAAGTCG
CAAATTGAGCATGCCATTGAAGGAGAAACAGTAGGTATCAATGATCAAAACATTGAGCTCTATAACGAAACCATAGATCT
TTATCAAACATTAGTTCCTCTAAATCAAGAGTTGCACCGTTTACGAATGAAAACGCAAAACTTAACTAATGAAAATTACA
ATATGAATGATGTCAAAGTTAAGAAAATCATTGAGAATGAACGACAGAGATTAGCTCGCGAGTTACATGACTCTGTAAGT
CAACAACTTTTTGCAGCAAGTATGATGTTATCTGCTATAAAAGAAACAAAATTAGAGGCACCGCTTGATCAACAAATACC
AGTTTTAGAGAAAATGGTTCAGGAATCTCAACTTGAAATGCGCGCATTATTACTTCATTTGAGACCTTTAGGACTAAAAG
ATAAATCACTAGGTGAAGGTATCAAAGATTTAGTTATTGATTTGCAAAAGAAAGTGCCTATGAAAGTCATACACGATATT
CAAGATTTCAAGGTTCCTAAAGGTATAGAAGATCATTTATTTAGAATTACACAAGAGGCTATATCAAATACGTTAAGACA
TTCTAATGGAACTAAAGTCACAGTGGAATTATTTAACCAACAAGATTATCTATTACTTCGAATTCAAGATAATGGTAAGG
GATTCAATGTTGACGAGAAATTAGAACAAAGTTATGGATTAAAAAATATGAGAGAACGCGCATTAGAAATTGGTGCGACA
TTCCATATTGTTTCGTTACCGGATTCTGGAACGAGAATAGAAGTTAAAGCACCATTAAATAGGGAGGATGATAATAATGA
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2A1K920

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.643

99.713

0.914