Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   MKD48_RS09655 Genome accession   NZ_CP092475
Coordinates   1889173..1890159 (-) Length   328 a.a.
NCBI ID   WP_000959286.1    Uniprot ID   A0AAX2MRT0
Organism   Staphylococcus aureus strain P5     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1884173..1895159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKD48_RS09630 - 1884433..1884780 (-) 348 WP_001242102.1 hypothetical protein -
  MKD48_RS09635 - 1884966..1885559 (+) 594 WP_000224621.1 CYTH domain-containing protein -
  MKD48_RS09640 - 1885663..1886028 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  MKD48_RS09645 yjbH 1886051..1886857 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  MKD48_RS09650 pepF 1887317..1889125 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  MKD48_RS09655 coiA 1889173..1890159 (-) 987 WP_000959286.1 competence protein CoiA family protein Machinery gene
  MKD48_RS09660 mecA 1890280..1890999 (-) 720 WP_001217724.1 adaptor protein MecA -
  MKD48_RS09665 tnpA 1891415..1891900 (-) 486 WP_000093392.1 IS200/IS605 family transposase -
  MKD48_RS09670 spxA 1892112..1892507 (-) 396 WP_000258001.1 transcriptional regulator SpxA -
  MKD48_RS09675 trpS 1892802..1893791 (+) 990 WP_000448941.1 tryptophan--tRNA ligase -
  MKD48_RS09680 - 1893817..1894326 (-) 510 Protein_1879 transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38770.45 Da        Isoelectric Point: 9.5881

>NTDB_id=657910 MKD48_RS09655 WP_000959286.1 1889173..1890159(-) (coiA) [Staphylococcus aureus strain P5]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLLLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=657910 MKD48_RS09655 WP_000959286.1 1889173..1890159(-) (coiA) [Staphylococcus aureus strain P5]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTTGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCCGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATTGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

99.085

100

0.991
  coiA Staphylococcus aureus MW2

97.866

100

0.979