Detailed information NTG0657492

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHB53_RS30380
• Genome accession: NZ_CP108258
• Coordinates: 6681762..6683048 (+)
• Length: 428 a.a.
• NCBI ID: WP_266564255.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00056
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6676762..6688048

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB53_RS30350 (OHB53_30295)	-	6677901..6678095 (+)	195	WP_100594330.1	hypothetical protein	-
OHB53_RS30365 (OHB53_30310)	tig	6678612..6680000 (+)	1389	WP_266670514.1	trigger factor	-
OHB53_RS30370 (OHB53_30315)	clpP	6680285..6680893 (+)	609	WP_116513663.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB53_RS30375 (OHB53_30320)	clpP	6680947..6681606 (+)	660	WP_266670511.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB53_RS30380 (OHB53_30325)	clpX	6681762..6683048 (+)	1287	WP_266564255.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHB53_RS30385 (OHB53_30330)	-	6683133..6683585 (-)	453	WP_266670508.1	hypothetical protein	-
OHB53_RS30390 (OHB53_30335)	-	6683762..6684709 (-)	948	WP_266670506.1	hypothetical protein	-
OHB53_RS30395 (OHB53_30340)	-	6684895..6687525 (+)	2631	WP_266670504.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46822.50 Da
• Isoelectric Point: 4.7856

>NTDB_id=657492 OHB53_RS30380 WP_266564255.1 6681762..6683048(+) (clpX) [Streptomyces sp. NBC_00056]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILLEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVHSNVNPTLIPRDARGSGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=657492 OHB53_RS30380 WP_266564255.1 6681762..6683048(+) (clpX) [Streptomyces sp. NBC_00056]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAAGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAAGGCTATGTCGTCGGCCAGGAGGCC
GCGAAGAAAGCCCTCTCGGTCGCTGTGTACAACCATTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGAGCCCAGGGACG
CGACGACGCGATCGAGCTGTCGAAGTCCAACATCCTGCTCCTGGGCCCCACGGGCTCGGGCAAGACACTCCTGGCCCAGA
CCCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCCGGCTATGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGTCCGGTGAGGGCGTCCAGCAGGCTC
TGCTCAAGATCCTTGAGGGGACCACGGCTTCCGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCATCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGACTGGAGAAGATCATCGAGTCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCACTCCAAGCGCGAGCTGGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATTCTCCTGGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCGCACCGGCGCGCGCGGCCTGC
GCGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCAGAGGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCCCGCGACGCCCGCGGCTCGGGCAGCGGAGAGCAGAAGTC
CGCCTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526