Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG953_RS24320 Genome accession   NZ_CP108256
Coordinates   5170030..5171154 (-) Length   374 a.a.
NCBI ID   WP_114245192.1    Uniprot ID   A0ABY9IUC4
Organism   Streptomyces sp. NBC_00057     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5165030..5176154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG953_RS24295 (OG953_24265) - 5165676..5166413 (-) 738 WP_405686832.1 hypothetical protein -
  OG953_RS24300 (OG953_24270) - 5166401..5167051 (-) 651 WP_093894040.1 SigE family RNA polymerase sigma factor -
  OG953_RS24305 (OG953_24275) - 5167227..5168129 (-) 903 WP_405686834.1 A/G-specific adenine glycosylase -
  OG953_RS24310 (OG953_24280) - 5168274..5168918 (-) 645 WP_405686835.1 phosphatase PAP2 family protein -
  OG953_RS24315 (OG953_24285) - 5169092..5169922 (+) 831 WP_405686836.1 hypothetical protein -
  OG953_RS24320 (OG953_24290) disA 5170030..5171154 (-) 1125 WP_114245192.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG953_RS24325 (OG953_24295) radA/sms 5171235..5172647 (-) 1413 WP_266360532.1 DNA repair protein RadA Machinery gene
  OG953_RS24330 (OG953_24300) - 5172885..5174753 (+) 1869 WP_405686839.1 BACON domain-containing protein -
  OG953_RS24335 (OG953_24305) - 5174852..5175694 (-) 843 WP_405686841.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40372.27 Da        Isoelectric Point: 4.9352

>NTDB_id=657407 OG953_RS24320 WP_114245192.1 5170030..5171154(-) (disA) [Streptomyces sp. NBC_00057]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=657407 OG953_RS24320 WP_114245192.1 5170030..5171154(-) (disA) [Streptomyces sp. NBC_00057]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTCC
TGGGCATGGACAGAACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAATTCACCGCGACGCGTCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCACCTCATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAATCAGGCACTCGCCACCCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACCCTCTC
GGCTCTGGAGATCGAGGACCTGGTGACGGTCCGGGATGTGACGGCCGTCGCACAGCGGCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCGGAGTACGTGGTGGAGCTGGGCACCGACGGCCGACTCCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGAGAGCTGGTCGTGCGCGACTATGTGCCGGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCCGA
AGCACTGACCGAACTCGACGCGCTCTCCCACACGGAACTGCTCGAACTCCCCGTCGTGGCACGGGCACTGGGGTACAGCG
GCTCGCCGGAGACGCTGGATTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTTGCCGCCAGCGTGGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGCGTGCAAGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTCGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436