Detailed information NTG0657321

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: MJO52_RS02865
• Genome accession: NZ_CP092418
• Coordinates: 636337..637743 (-)
• Length: 468 a.a.
• NCBI ID: WP_252084457.1
• Uniprot ID: -
• Organism: Microbulbifer variabilis strain SCSIO 43006
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 631337..642743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MJO52_RS02850 (MJO52_02850)	-	631836..632381 (+)	546	WP_252084455.1	PilX N-terminal domain-containing pilus assembly protein	-
MJO52_RS02855 (MJO52_02855)	-	632388..635801 (+)	3414	WP_252085956.1	PilC/PilY family type IV pilus protein	-
MJO52_RS02860 (MJO52_02860)	-	635815..636246 (+)	432	WP_252084456.1	type IV pilin protein	-
MJO52_RS02865 (MJO52_02865)	pilR	636337..637743 (-)	1407	WP_252084457.1	sigma-54 dependent transcriptional regulator	Regulator
MJO52_RS02870 (MJO52_02870)	-	637875..639455 (-)	1581	WP_252084458.1	ATP-binding protein	-
MJO52_RS02875 (MJO52_02875)	-	639545..641173 (+)	1629	WP_252084459.1	NAD+ synthase	-
MJO52_RS02880 (MJO52_02880)	-	641232..642164 (-)	933	WP_252084460.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 468 a.a.
• Molecular weight: 52139.41 Da
• Isoelectric Point: 6.0858

>NTDB_id=657321 MJO52_RS02865 WP_252084457.1 636337..637743(-) (pilR) [Microbulbifer variabilis strain SCSIO 43006]
MLPLALVVDDEPDICKLITLTLQRMDVNCHTAASLAEATRLLKENHYDFCLTDLRLPDGDGLQLVEHIQSGVLRDLPIAV
ITAHGNMDTAIKALKLGAFDFVSKPVDLERLRNLAQLALRVNRERDPQQSKSAKQLLLGEAPNMRKLREQIAKVARSDAP
VYISGESGSGKELAARSIHSQGARADKPFVPINCGAIPTDLMESEFFGHKKGSFTGAHKDKAGLLQSAQGGTLFLDEVAD
LPLDMQVKLLRTIQEKRIRAIGASQETPIDVRILSATHKDLAKEVTEGRFRNDLYYRINVIEISTPPLRERSEDIPLLVD
AIMQRIAQNSGTIPPGISTDAMQALQAFPFPGNVRQLENILERAFTLCDHQEICLDDLLLEKDEQSQDREASSTSTKGEA
LNRNQSEENNRFDPSQYNSLDEFLQNIEKEAIESALTKTRWNRTAAAQKLGISFRSLRYRLKKLGLET

Nucleotide

• Length: 1407 bp

>NTDB_id=657321 MJO52_RS02865 WP_252084457.1 636337..637743(-) (pilR) [Microbulbifer variabilis strain SCSIO 43006]
ATGCTACCTCTGGCCCTGGTTGTCGATGACGAACCGGATATCTGCAAACTAATCACACTCACTCTGCAGCGCATGGATGT
GAACTGTCACACCGCCGCCAGCTTAGCGGAGGCAACACGCCTGCTTAAAGAGAACCACTATGATTTTTGCCTGACCGACC
TGCGTCTGCCAGATGGCGATGGTCTACAACTAGTCGAGCATATCCAGAGTGGTGTTCTTCGAGACTTGCCCATCGCAGTG
ATTACCGCGCACGGCAATATGGATACTGCCATTAAGGCGCTAAAGCTCGGCGCATTTGACTTTGTCAGTAAACCGGTCGA
TTTAGAACGGCTTCGCAACCTCGCTCAGCTGGCCCTACGCGTGAATAGGGAGCGAGATCCACAACAGAGCAAGAGCGCGA
AGCAGCTGCTCTTAGGGGAAGCCCCCAATATGCGCAAGCTGCGCGAACAGATAGCCAAAGTTGCGCGCAGTGATGCCCCG
GTTTATATCAGTGGCGAATCGGGCTCAGGTAAAGAACTGGCTGCCCGGTCCATTCATTCCCAGGGAGCCCGTGCCGACAA
ACCTTTCGTACCCATTAACTGTGGAGCCATTCCCACTGACCTTATGGAGAGCGAGTTTTTTGGGCATAAAAAAGGCAGTT
TTACCGGCGCACATAAAGACAAAGCGGGCCTACTACAGAGTGCTCAGGGCGGTACTCTATTTCTCGACGAAGTTGCCGAC
CTACCCCTGGATATGCAGGTCAAGCTTTTGCGTACAATACAGGAAAAACGCATTCGGGCTATAGGCGCAAGTCAGGAAAC
TCCTATCGATGTACGTATCCTCAGCGCTACTCACAAGGACCTAGCCAAAGAGGTCACCGAAGGGCGCTTTCGCAACGACC
TCTATTACCGCATCAATGTAATCGAAATATCCACACCCCCTCTACGCGAGCGCAGTGAAGATATACCTTTATTGGTCGAT
GCCATTATGCAGCGTATTGCCCAAAATTCAGGGACAATACCCCCTGGCATATCTACCGATGCCATGCAAGCCCTACAGGC
TTTCCCCTTTCCCGGTAATGTTCGCCAACTCGAAAATATCCTCGAACGCGCCTTTACCCTATGCGATCATCAGGAAATTT
GCCTTGATGACCTGCTACTGGAGAAGGATGAGCAATCGCAAGATCGAGAGGCTTCCTCTACTAGCACTAAAGGTGAAGCC
TTAAATAGAAACCAATCGGAAGAAAACAATCGCTTTGATCCCAGCCAGTACAACTCCCTAGATGAATTTCTGCAGAATAT
TGAAAAAGAAGCAATTGAGAGCGCACTCACCAAGACTCGCTGGAACCGTACCGCTGCAGCTCAGAAACTTGGTATCAGTT
TTCGCTCACTGCGTTACCGGTTGAAGAAATTGGGGCTGGAGACTTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (424-464)

• Response regulator receiver domain (Response_reg) (6-114)

• Sigma-54 interaction domain (Sigma54_activat) (138-303)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	57.543	99.145	0.571
pilR	Acinetobacter baumannii strain A118	48.945	100	0.496