Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MJO57_RS00450 Genome accession   NZ_CP092417
Coordinates   114595..115005 (-) Length   136 a.a.
NCBI ID   WP_252022016.1    Uniprot ID   -
Organism   Endozoicomonas sp. SCSIO W0465     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 109595..120005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJO57_RS00435 (MJO57_00435) - 111288..113285 (-) 1998 WP_371924854.1 methyl-accepting chemotaxis protein -
  MJO57_RS00440 (MJO57_00440) - 113419..113976 (-) 558 WP_252022015.1 chemotaxis protein CheW -
  MJO57_RS00445 (MJO57_00445) pilH 114084..114458 (-) 375 WP_252026872.1 twitching motility response regulator PilH -
  MJO57_RS00450 (MJO57_00450) pilG 114595..115005 (-) 411 WP_252022016.1 PleD family two-component system response regulator Regulator
  MJO57_RS00455 (MJO57_00455) - 115296..116576 (+) 1281 WP_252026874.1 TolC family outer membrane protein -
  MJO57_RS00460 (MJO57_00460) - 116664..118646 (-) 1983 WP_252022017.1 hypothetical protein -
  MJO57_RS00465 (MJO57_00465) hslO 118821..119690 (+) 870 WP_252022018.1 Hsp33 family molecular chaperone HslO -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15090.47 Da        Isoelectric Point: 6.4598

>NTDB_id=657283 MJO57_RS00450 WP_252022016.1 114595..115005(-) (pilG) [Endozoicomonas sp. SCSIO W0465]
MHDGEKIVGKDLKVMIIDDSKTIRRTAETLLAKAGCQVVTATDGFDSLAKIAESEPDIIFVDIMMPRLDGYQTCALIKNN
SAFKKIPVIMLSSKDGLFDRARGRIAGSDYYLTKPFSRDELFGTIREHCPDYALAV

Nucleotide


Download         Length: 411 bp        

>NTDB_id=657283 MJO57_RS00450 WP_252022016.1 114595..115005(-) (pilG) [Endozoicomonas sp. SCSIO W0465]
ATGCACGATGGCGAAAAAATCGTCGGAAAAGACCTCAAGGTCATGATTATTGATGACAGCAAGACGATTCGTCGTACTGC
TGAAACACTGCTGGCAAAAGCAGGTTGCCAGGTGGTTACCGCCACCGATGGCTTTGACTCATTGGCAAAAATCGCCGAGT
CCGAACCAGACATCATCTTTGTCGATATCATGATGCCTCGTCTTGACGGCTATCAAACCTGTGCGCTGATTAAAAATAAC
AGCGCATTTAAAAAGATTCCTGTCATCATGCTATCGAGTAAGGATGGCCTCTTCGACCGTGCCAGAGGACGAATTGCCGG
TTCAGATTACTACCTGACCAAACCATTCAGCCGTGATGAGCTCTTCGGAACTATTCGGGAACACTGTCCTGATTATGCTC
TGGCCGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-125)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.95

87.5

0.647
  vicR Streptococcus mutans UA159

41.88

86.029

0.36