Detailed information NTG0657208

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: MH925_RS02050
• Genome accession: NZ_CP092412
• Coordinates: 401152..402300 (+)
• Length: 382 a.a.
• NCBI ID: WP_012116798.1
• Uniprot ID: A3KLC9
• Organism: Bacillus velezensis strain HNU24
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 396152..407300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MH925_RS02030	-	396549..397232 (-)	684	WP_012116795.1	ABC transporter ATP-binding protein	-
MH925_RS02035	-	397247..398683 (-)	1437	WP_012116796.1	ABC transporter permease	-
MH925_RS02040	-	398896..399579 (+)	684	WP_007410267.1	response regulator transcription factor	-
MH925_RS02045	-	399566..400999 (+)	1434	WP_162303988.1	sensor histidine kinase	-
MH925_RS02050	rapC	401152..402300 (+)	1149	WP_012116798.1	Rap family tetratricopeptide repeat protein	Regulator
MH925_RS02055	phrC	402284..402403 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
MH925_RS02060	-	402552..402662 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
MH925_RS02065	-	402742..404106 (-)	1365	WP_012116801.1	aspartate kinase	-
MH925_RS02070	ceuB	404520..405473 (+)	954	WP_012116802.1	ABC transporter permease	Machinery gene
MH925_RS02075	-	405463..406410 (+)	948	WP_012116803.1	iron chelate uptake ABC transporter family permease subunit	-
MH925_RS02080	-	406404..407162 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45490.68 Da
• Isoelectric Point: 4.9916

>NTDB_id=657208 MH925_RS02050 WP_012116798.1 401152..402300(+) (rapC) [Bacillus velezensis strain HNU24]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRAQYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=657208 MH925_RS02050 WP_012116798.1 401152..402300(+) (rapC) [Bacillus velezensis strain HNU24]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCAGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

3D structure

• AlphaFold DB: A3KLC9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	56.842	99.476	0.565