Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG787_RS19955 Genome accession   NZ_CP108243
Coordinates   4620954..4622078 (+) Length   374 a.a.
NCBI ID   WP_235475871.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00075     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4615954..4627078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG787_RS19940 (OG787_19885) - 4616560..4617408 (+) 849 WP_369034049.1 hypothetical protein -
  OG787_RS19945 (OG787_19890) - 4617434..4619221 (-) 1788 WP_405535914.1 BACON domain-containing protein -
  OG787_RS19950 (OG787_19895) radA/sms 4619463..4620872 (+) 1410 WP_405535915.1 DNA repair protein RadA Machinery gene
  OG787_RS19955 (OG787_19900) disA 4620954..4622078 (+) 1125 WP_235475871.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG787_RS19960 (OG787_19905) - 4622148..4623005 (-) 858 WP_405535916.1 hypothetical protein -
  OG787_RS19965 (OG787_19910) - 4623605..4624522 (+) 918 WP_369034053.1 A/G-specific adenine glycosylase -
  OG787_RS19970 (OG787_19915) - 4624793..4625335 (+) 543 WP_369034054.1 SigE family RNA polymerase sigma factor -
  OG787_RS19975 (OG787_19920) - 4625539..4626150 (+) 612 WP_405535917.1 hypothetical protein -
  OG787_RS19980 (OG787_19925) cseB 4626206..4626913 (+) 708 WP_235475875.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39903.62 Da        Isoelectric Point: 4.8454

>NTDB_id=657121 OG787_RS19955 WP_235475871.1 4620954..4622078(+) (disA) [Streptomyces sp. NBC_00075]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFSATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFSVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAEYVLELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDALSHAELLELSTVAKALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=657121 OG787_RS19955 WP_235475871.1 4620954..4622078(+) (disA) [Streptomyces sp. NBC_00075]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCTGGCACGGCGCTGCGCGACGGGCTTGAACGGATTCTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAGGCGATGTGCACGGGCGGTTTCGTCCTGGACGTCGAGTTCTCGGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCGTCGGACCTGTCCAAGATCCTGCGGGCCGGCGTCCAGCTGGTCCC
CGACCCGACGATCCCCACCGAGGAGACGGGCACCAGGCACCGCACCGCCGACCGAGTGTCGAAACAAGTCGGCTTCTCGG
TCGTCTCGGTCTCCCAGTCCATGCGCCTGATCGCGCTGTACGTGGACGGCCAGCGCCGTGTCCTGGAGGACTCGGCCGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTCGTCCAGCGCCTGGAGATGGTCCGCCTCATCG
CGACGGAGATCGCCGAGTACGTACTCGAGTTGGGCACCGACGGACGCCTCCTGGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAACGCGAGCTGGTGGTCCGGGACTACGTCCCTGAGCCGACCGCCAAACGCTCCCGCACGGTCGACGA
GGCGCTCGCGGAACTCGACGCGCTGAGCCACGCCGAACTCCTCGAACTCTCCACGGTGGCCAAGGCCCTGGGCTACACGG
GCTCACCCGAGACCCTCGACTCGGCGGTCTCCCCCCGCGGCTTCCGCCTCCTGGCGAAGGTGCCGCGCCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAACACTTCGGCGGCCTCCAGAAGCTGCTGGCGGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGAGGGCGCGGAGCGTGCGGGAGGGCCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444