Detailed information NTG0657064

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: MID02_RS17440
• Genome accession: NZ_CP092383
• Coordinates: 3549701..3550864 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SF327
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3544701..3555864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MID02_RS17410 (MID02_17410)	-	3544966..3545385 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
MID02_RS17415 (MID02_17415)	comFC	3545459..3546148 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
MID02_RS17420 (MID02_17420)	-	3546154..3546438 (-)	285	WP_003151389.1	competence protein ComFB	-
MID02_RS17425 (MID02_17425)	comFA	3546496..3547881 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
MID02_RS17430 (MID02_17430)	-	3547989..3548837 (-)	849	WP_024085866.1	DegV family protein	-
MID02_RS17435 (MID02_17435)	degU	3548935..3549624 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
MID02_RS17440 (MID02_17440)	degS	3549701..3550864 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
MID02_RS17445 (MID02_17445)	-	3551087..3551734 (+)	648	WP_003151384.1	YigZ family protein	-
MID02_RS17450 (MID02_17450)	-	3551739..3552953 (+)	1215	WP_057080262.1	LCP family protein	-
MID02_RS17455 (MID02_17455)	-	3553043..3554119 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
MID02_RS17460 (MID02_17460)	-	3554252..3555448 (-)	1197	WP_239819280.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=657064 MID02_RS17440 WP_003151385.1 3549701..3550864(-) (degS) [Bacillus velezensis strain SF327]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=657064 MID02_RS17440 WP_003151385.1 3549701..3550864(-) (degS) [Bacillus velezensis strain SF327]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948