Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHU33_RS21135 Genome accession   NZ_CP108237
Coordinates   4549043..4550167 (+) Length   374 a.a.
NCBI ID   WP_266519052.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00079     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4544043..4555167
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU33_RS21120 (OHU33_21010) - 4544556..4545422 (+) 867 WP_266519059.1 hypothetical protein -
  OHU33_RS21125 (OHU33_21015) - 4545638..4547332 (-) 1695 WP_266519056.1 BACON domain-containing protein -
  OHU33_RS21130 (OHU33_21020) radA 4547552..4548961 (+) 1410 WP_266519054.1 DNA repair protein RadA Machinery gene
  OHU33_RS21135 (OHU33_21025) disA 4549043..4550167 (+) 1125 WP_266519052.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHU33_RS21140 (OHU33_21030) - 4550305..4550757 (+) 453 WP_266519050.1 RICIN domain-containing protein -
  OHU33_RS21145 (OHU33_21035) - 4550856..4551668 (-) 813 WP_266844664.1 hypothetical protein -
  OHU33_RS21150 (OHU33_21040) - 4551835..4552782 (+) 948 WP_266519043.1 A/G-specific adenine glycosylase -
  OHU33_RS21155 (OHU33_21045) - 4553045..4553584 (+) 540 WP_266519041.1 SigE family RNA polymerase sigma factor -
  OHU33_RS21160 (OHU33_21050) - 4553572..4554234 (+) 663 WP_266519039.1 hypothetical protein -
  OHU33_RS21165 (OHU33_21055) cseB 4554287..4554991 (+) 705 WP_266519037.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40123.90 Da        Isoelectric Point: 4.9989

>NTDB_id=656934 OHU33_RS21135 WP_266519052.1 4549043..4550167(+) (disA) [Streptomyces sp. NBC_00079]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTGLRDGLERVLRGNTGGLIVLGFDKTVETMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQFLPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELNALAHAELLELPTVARALGYTGAPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=656934 OHU33_RS21135 WP_266519052.1 4549043..4550167(+) (disA) [Streptomyces sp. NBC_00079]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGTTCCGGTGCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCTCCCGGTACCGGCCTGCGCGACGGCCTTGAGCGCGTACTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTTCGACAAGACCGTCGAAACCATGTGCACGGGCGGTTTCGTGCTCGACGTCGAGTTCACGGCCACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCCTCGGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGTTCCTGCC
CGACGCGACGATCCCGACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGCGTCTCGAAGCAGGTCGGCTTCCCGG
TCGTCTCCGTCTCCCAGTCGATGCGCCTGATCGCCCTCTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGATGTGTCGGCGGTGGCCCAGCGTCTGGAGATGGTGCGCCGCATCG
CGACCGAAATCGCCGAATACGTGGTCGAACTGGGCACCGACGGGCGTCTGCTGGCCCTGCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCCACGGCCAAGCGCTCGCGCACGGTCGACGA
GGCGCTCTACGAACTCAATGCCCTCGCCCACGCCGAGCTTCTCGAACTGCCCACGGTGGCAAGGGCGTTGGGATACACCG
GGGCTCCGGAAACCCTGGACTCGGCGGTCTCGCCGCGCGGCTTCCGCCTGCTGGCCAAGGTGCCGCGTCTCCCGGGCGCC
ATCATCGACCGTCTTGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTGCAGACCGTCGA
CGGCGTCGGCGAGGCACGGGCCCGGAGCGTTCGGGAAGGTCTGTCGCGGCTGGCCGAGTCCTCCATTCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441