Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG361_RS17705 Genome accession   NZ_CP108224
Coordinates   4013227..4014351 (+) Length   374 a.a.
NCBI ID   WP_384576699.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00090     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4008227..4019351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG361_RS17690 (OG361_17690) - 4008477..4009349 (+) 873 WP_405854668.1 hypothetical protein -
  OG361_RS17695 (OG361_17695) - 4009456..4011294 (-) 1839 WP_405854670.1 BACON domain-containing protein -
  OG361_RS17700 (OG361_17700) radA/sms 4011546..4012949 (+) 1404 WP_405854671.1 DNA repair protein RadA Machinery gene
  OG361_RS17705 (OG361_17705) disA 4013227..4014351 (+) 1125 WP_384576699.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG361_RS17710 (OG361_17710) - 4014598..4015455 (-) 858 WP_405854674.1 hypothetical protein -
  OG361_RS17715 (OG361_17715) - 4015681..4016364 (+) 684 WP_405854676.1 phosphatase PAP2 family protein -
  OG361_RS17720 (OG361_17720) - 4016398..4017396 (+) 999 WP_405854678.1 A/G-specific adenine glycosylase -
  OG361_RS17725 (OG361_17725) - 4017660..4018232 (+) 573 WP_384576688.1 SigE family RNA polymerase sigma factor -
  OG361_RS17730 (OG361_17730) - 4018220..4019047 (+) 828 WP_405854680.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40121.98 Da        Isoelectric Point: 5.1093

>NTDB_id=656672 OG361_RS17705 WP_384576699.1 4013227..4014351(+) (disA) [Streptomyces sp. NBC_00090]
MAAKDGAAAPGKSGAGSGNEALMRAALSAVAPGTALRDGLERILRGSTGGLIVLGLDKTVDSMCTGGFVLDVEFAATRLR
ELCKLDGALVLDKDITKIHRAGVQLVPDASIPTDETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALTHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=656672 OG361_RS17705 WP_384576699.1 4013227..4014351(+) (disA) [Streptomyces sp. NBC_00090]
GTGGCAGCCAAGGACGGGGCAGCAGCTCCTGGAAAATCCGGCGCGGGCTCCGGCAATGAAGCGCTGATGCGTGCCGCCCT
GAGCGCGGTCGCACCGGGCACCGCCCTGCGCGACGGCCTGGAGCGGATCCTCCGGGGAAGCACCGGCGGTCTCATCGTGC
TCGGCCTGGACAAGACGGTCGACTCGATGTGCACCGGCGGTTTCGTGCTGGACGTCGAGTTCGCCGCGACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCGTCCTCGACAAGGACATCACCAAGATCCACCGAGCCGGTGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGACGAGACCGGCACCCGCCACCGCACCGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCCGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGAACGGCGAGCGCCGGGTCCTGGAGGAGTCGGCCGCG
ATCCTCTCCCGCGCGAACCAGGCGCTCGCGACGCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTGGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCACCGCCGTCGCCCAGCGCCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTCGGCACCGACGGACGGCTCCTGTCGCTCCAGCTCGACGAGCTCATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGGTCCGGGACTACGTGCCCGAGCCCACGGCCAAGCGCTCGCGGACGGTCGCCGA
GGCGCTCACCGAGCTGGACGCGCTCACCCACACCGAGCTGCTCGAACTTCCCGTGGTGGCCAGGGCACTCGGCTACAGCG
GTTCGCCCGAGACCCTCGACTCGGCCGTCTCGCCGCGCGGCTACCGGCTCCTCGCCAAGGTGCCGCGACTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTCCTCGCGGCGAGCGTGGACGACCTGCAGACCGTCGA
CGGGGTCGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTGTCGCGGCTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43