Detailed information NTG0656664

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG361_RS13815
• Genome accession: NZ_CP108224
• Coordinates: 3145730..3147013 (-)
• Length: 427 a.a.
• NCBI ID: WP_015033605.1
• Uniprot ID: A0ABV3CXR2
• Organism: Streptomyces sp. NBC_00090
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3140730..3152013

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG361_RS13805 (OG361_13810)	-	3141902..3144550 (-)	2649	WP_405853589.1	valine--tRNA ligase	-
OG361_RS13810 (OG361_13815)	-	3144689..3145645 (+)	957	WP_405853590.1	hypothetical protein	-
OG361_RS13815 (OG361_13820)	clpX	3145730..3147013 (-)	1284	WP_015033605.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG361_RS13820 (OG361_13825)	clpP	3147170..3147832 (-)	663	WP_317601865.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG361_RS13825 (OG361_13830)	clpP	3147895..3148512 (-)	618	WP_384558565.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG361_RS13830 (OG361_13835)	tig	3148915..3150300 (-)	1386	WP_384558562.1	trigger factor	-
OG361_RS13845 (OG361_13850)	-	3150890..3151084 (-)	195	WP_024755527.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46743.58 Da
• Isoelectric Point: 4.8738

>NTDB_id=656664 OG361_RS13815 WP_015033605.1 3145730..3147013(-) (clpX) [Streptomyces sp. NBC_00090]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPRIVKNDGRHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=656664 OG361_RS13815 WP_015033605.1 3145730..3147013(-) (clpX) [Streptomyces sp. NBC_00090]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACGA
GCGAGGTGCGGTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCGAAGTCCAACATTCTGCTCCTCGGCCCCACGGGGTCAGGGAAGACGCTGCTCGCGCAGA
CCCTGGCCCGGATGCTCAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGTGACGTGAGCGGTGAGGGCGTCCAGCAGGCCC
TCCTCAAGATCCTTGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACCATCCGCTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTCCCGGTCCTCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTCGTCGAGCCGCGGAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCCGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGAGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGGAACAACGTCAACCCGACGCTGGTCCCCCGGATCGTGAAGAACGACGGCAGGCACGAGAAGTCGGC
CTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	94.145	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.528	96.253	0.515