Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG904_RS16615 Genome accession   NZ_CP108221
Coordinates   3773764..3774888 (-) Length   374 a.a.
NCBI ID   WP_281209182.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00096     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3768764..3779888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG904_RS16590 (OG904_16580) - 3769316..3769876 (-) 561 WP_405491652.1 SigE family RNA polymerase sigma factor -
  OG904_RS16595 (OG904_16585) - 3770090..3770974 (-) 885 Protein_3264 A/G-specific adenine glycosylase -
  OG904_RS16600 (OG904_16590) - 3770998..3771612 (-) 615 WP_405491654.1 phosphatase PAP2 family protein -
  OG904_RS16605 (OG904_16595) - 3771773..3772600 (+) 828 WP_405491656.1 hypothetical protein -
  OG904_RS16610 (OG904_16600) - 3772868..3773742 (+) 875 WP_405491658.1 IS5 family transposase -
  OG904_RS16615 (OG904_16605) disA 3773764..3774888 (-) 1125 WP_281209182.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG904_RS16620 (OG904_16610) radA/sms 3775031..3776455 (-) 1425 WP_405491660.1 DNA repair protein RadA Machinery gene
  OG904_RS16625 (OG904_16615) - 3776638..3778530 (+) 1893 WP_405491662.1 BACON domain-containing protein -
  OG904_RS16630 (OG904_16620) - 3778551..3779426 (-) 876 WP_405491663.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40402.38 Da        Isoelectric Point: 5.1222

>NTDB_id=656603 OG904_RS16615 WP_281209182.1 3773764..3774888(-) (disA) [Streptomyces sp. NBC_00096]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELAIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=656603 OG904_RS16615 WP_281209182.1 3773764..3774888(-) (disA) [Streptomyces sp. NBC_00096]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGCGCCAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCGCCTGGTCAGCCGCTGCGTGACGGGCTGGAACGGATCGTCCGCGGCAACACCGGAGGGCTGATCGTCC
TCGGCATGGACAAGTCCGTCGAGGCGATGTGCACCGGCGGATTCGTCCTGGACGTGGAGTTCACGGCGACCCGGTTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTGGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGCTGGTGCC
GGACGCGTCCATCCACACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGGGTCTCGAAGCAGTGCGGTTTCCCGG
TGGTGTCGGTCTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGGCGCGTGCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCCGGGACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCACGGCGGTGGCGCAGCGGCTGGAAATGGTGCGGCGCATCG
CGACGGAGATCGCGGAGTACGTGGTGGAACTCGGCACGGACGGCCGTCTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGAGGA
GGCGCTGCCGGCCCTGGACGCGCTGACGCATCCGGAGCTGCTGGAGCTGGCGATCGTGGCGCGGGCCCTGGGCTACACCG
GCTCGCCGGAGACCCTGGACTCGGCGGTGTCCCCGCGCGGGTACCGGCTGCTGGCGAAGGTTCCGCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCGTCGGTGGACGACCTGCAGACGGTGGA
CGGCGTCGGCGAGGCGCGTGCGCGCAGCGTCCGCGAGGGTCTGTCCCGGCTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441